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Support counts the member genes carrying the term. % of genes is that count over all 2,252 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 1928 / 2,252 | 85.6% | 97.9% of 1,970 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1977 / 2,252 | 87.8% | 99.8% of 1,982 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1923 / 2,252 | 85.4% | 97.0% of 1,982 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1851 / 2,252 | 82.2% | 93.4% of 1,982 | ≥80% support |
| PANTHER | PTHR24329 | HOMEOBOX PROTEIN ARISTALESS | 1394 / 2,252 | 61.9% | 71.5% of 1,951 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1765 / 2,252 | 78.4% | 89.1% of 1,982 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1404 / 2,252 | 62.3% | 70.8% of 1,982 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Clytia hemisphaerica | XP_066915289.1 | ALJ33539.1 | Prdl-d, partial [Clytia hemisphaerica] | Q8BYH0 Dorsal root ganglia homeobox protein OS=Mus musculus OX=1009 | JBrowse |
| Clytia hemisphaerica | XP_066918010.1 | ALJ33549.1 | Unc, partial [Clytia hemisphaerica] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Clytia hemisphaerica | XP_066918012.1 | ALJ33549.1 | Unc, partial [Clytia hemisphaerica] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Clytia hemisphaerica | XP_066920723.1 | ALY05312.1 | paired-like homeodomain protein [Clytia hemisphaerica] | Q21836 Homeobox ARX homolog alr-1 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Clytia hemisphaerica | XP_066927247.1 | ALJ33538.1 | Prdl-b, partial [Clytia hemisphaerica] | O42115 Aristaless-related homeobox protein OS=Danio rerio OX=7955 G | JBrowse |
| Clytia hemisphaerica | XP_066928422.1 | ALJ33542.1 | Rx [Clytia hemisphaerica] | Q26657 Aristaless homeobox protein (Fragment) OS=Strongylocentrotus | JBrowse |
| Clytia hemisphaerica | XP_066930214.1 | XP_012566844.1 | short stature homeobox protein [Hydra vulgaris] | Q90963 Paired mesoderm homeobox protein 2 (Fragment) OS=Gallus gall | JBrowse |
| Clytia hemisphaerica | XP_066931136.1 | XP_004208605.2 | visual system homeobox 2-like [Hydra vulgaris] | P41935 Homeobox protein ceh-10 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Clytia hemisphaerica | XP_066931370.1 | ADM21469.1 | goosecoid [Hydractinia echinata] | P53544 Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE= | JBrowse |
| Clytia hemisphaerica | XP_066933578.1 | ALJ33551.1 | PaxC, partial [Clytia hemisphaerica] | O18381 Paired box protein Pax-6 OS=Drosophila melanogaster OX=7227 | JBrowse |
| Clytia hemisphaerica | XP_066935210.1 | CEG06177.1 | DRGX homeobox transcription factor, partial [Clytia hemisphaerica] | A6NNA5 Dorsal root ganglia homeobox protein OS=Homo sapiens OX=9606 | JBrowse |
