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Support counts the member genes carrying the term. % of genes is that count over all 1,759 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 1462 / 1,759 | 83.1% | 99.9% of 1,464 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1493 / 1,759 | 84.9% | 99.9% of 1,494 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1476 / 1,759 | 83.9% | 98.8% of 1,494 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Clytia hemisphaerica | XP_066910848.1 | XP_047134629.1 | heterogeneous nuclear ribonucleoprotein A3 isoform X2 [Hydra vulgaris] | P48810 Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila me | JBrowse |
| Clytia hemisphaerica | XP_066920101.1 | XP_012559382.1 | heterogeneous nuclear ribonucleoprotein A0 [Hydra vulgaris] | Q5RBU8 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abel | JBrowse |
| Clytia hemisphaerica | XP_066920102.1 | XP_012559382.1 | heterogeneous nuclear ribonucleoprotein A0 [Hydra vulgaris] | Q5RBU8 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abel | JBrowse |
| Clytia hemisphaerica | XP_066921188.1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | Q2HJ60 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus | JBrowse |
| Clytia hemisphaerica | XP_066921189.1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | Q2HJ60 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus | JBrowse |
| Clytia hemisphaerica | XP_066921190.1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | Q2HJ60 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus | JBrowse |
| Clytia hemisphaerica | XP_066921191.1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | Q2HJ60 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus | JBrowse |
| Clytia hemisphaerica | XP_066922858.1 | XP_047134629.1 | heterogeneous nuclear ribonucleoprotein A3 isoform X2 [Hydra vulgaris] | P07909 Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila mel | JBrowse |
| Clytia hemisphaerica | XP_066927119.1 | XP_002155150.3 | uncharacterized RNA-binding protein C660.15 [Hydra vulgaris] | P07909 Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila mel | JBrowse |
| Clytia hemisphaerica | XP_066932230.1 | XP_012555247.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | Q99383 Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyce | JBrowse |
| Clytia hemisphaerica | XP_066932231.1 | XP_012555247.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | Q99383 Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyce | JBrowse |
| Clytia hemisphaerica | XP_066932232.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | Q98SJ2 DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 | JBrowse |
| Clytia hemisphaerica | XP_066932233.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | Q98SJ2 DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 | JBrowse |
| Clytia hemisphaerica | XP_066932234.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Clytia hemisphaerica | XP_066932235.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Clytia hemisphaerica | XP_066932236.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | Q98SJ2 DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 | JBrowse |
| Clytia hemisphaerica | XP_066932237.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | Q98SJ2 DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 | JBrowse |
| Clytia hemisphaerica | XP_066932238.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Clytia hemisphaerica | XP_066933440.1 | XP_047144972.1 | heterogeneous nuclear ribonucleoprotein A/B-like [Hydra vulgaris] | Q08473 RNA-binding protein squid OS=Drosophila melanogaster OX=7227 | JBrowse |
| Clytia hemisphaerica | XP_066933441.1 | XP_047144972.1 | heterogeneous nuclear ribonucleoprotein A/B-like [Hydra vulgaris] | Q08473 RNA-binding protein squid OS=Drosophila melanogaster OX=7227 | JBrowse |
