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Support counts the member genes carrying the term. % of genes is that count over all 437 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22734 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 | 384 / 437 | 87.9% | 99.5% of 386 | ≥80% support |
| Pfam | PF04427 | Brix | 368 / 437 | 84.2% | 99.2% of 371 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 384 / 437 | 87.9% | 99.7% of 385 | ≥80% support |
| GO | GO:0006364 Biological Process | rRNA processing | 384 / 437 | 87.9% | 99.7% of 385 | ≥80% support |
| GO | GO:0042134 Molecular Function | rRNA primary transcript binding | 384 / 437 | 87.9% | 99.7% of 385 | ≥80% support |
| GO | GO:0019843 Molecular Function | rRNA binding | 381 / 437 | 87.2% | 99.0% of 385 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Clytia hemisphaerica | XP_066912731.1 | XP_047122431.1 | U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 [Hydra vulgaris] | Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus mus | JBrowse |
| Clytia hemisphaerica | XP_066913267.1 | XP_047123105.1 | ribosome production factor 1 [Hydra vulgaris] | Q9H9Y2 Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 | JBrowse |
| Clytia hemisphaerica | XP_066913652.1 | XP_047122431.1 | U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 [Hydra vulgaris] | Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus mus | JBrowse |
