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This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000005536.1 | XP_034038793.1 | cold-inducible RNA-binding protein-like isoform X2 [Thalassophryne amazonica] | A5E1Z4 Eukaryotic translation initiation factor 3 subunit G OS=Lodd | JBrowse |
| Catostylus mosaicus | ENSSJYP00000011551.1 | MCF6277063.1 | RNA-binding protein [Candidatus Magasanikbacteria bacterium] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Catostylus mosaicus | ENSSJYP00000012493.1 | RME60763.1 | RNA-binding protein [Candidatus Dadabacteria bacterium] | Q9LIN3 Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thalian | JBrowse |
| Catostylus mosaicus | ENSSJYP00000012499.1 | RME60763.1 | RNA-binding protein [Candidatus Dadabacteria bacterium] | Q9LIN3 Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thalian | JBrowse |
| Catostylus mosaicus | ENSSJYP00000014679.1 | MBI2452214.1 | RNA-binding protein [Candidatus Pacearchaeota archaeon] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Catostylus mosaicus | ENSSJYP00000015002.1 | XP_001628811.1 | SRA stem-loop-interacting RNA-binding protein, mitochondrial isoform X1 [Nematostella vectensis] | Q99729 Heterogeneous nuclear ribonucleoprotein A/B OS=Homo sapiens | JBrowse |
| Catostylus mosaicus | ENSSJYP00000015142.1 | MCF6277063.1 | RNA-binding protein [Candidatus Magasanikbacteria bacterium] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
