← Back to the gene family browser
This orthogroup contains 356 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 356 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11451 | THREONINE-TRNA LIGASE | 311 / 356 | 87.4% | 99.7% of 312 | ≥80% support |
| GO | GO:0004829 Molecular Function | threonine-tRNA ligase activity | 311 / 356 | 87.4% | 99.7% of 312 | ≥80% support |
| GO | GO:0006435 Biological Process | threonyl-tRNA aminoacylation | 311 / 356 | 87.4% | 99.7% of 312 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 291 / 356 | 81.7% | 93.3% of 312 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 291 / 356 | 81.7% | 93.3% of 312 | ≥80% support |
| GO | GO:0004812 Molecular Function | aminoacyl-tRNA ligase activity | 287 / 356 | 80.6% | 92.0% of 312 | ≥80% support |
| Pfam | PF00587 | tRNA-synt_2b — tRNA synthetase class II core domain (G, H, P, S and T) | 274 / 356 | 77.0% | 88.1% of 311 | ≥50% support |
| Pfam | PF03129 | HGTP_anticodon — Anticodon binding domain | 265 / 356 | 74.4% | 85.2% of 311 | ≥50% support |
| Pfam | PF07973 | tRNA_SAD — Threonyl and Alanyl tRNA synthetase second additional domain | 255 / 356 | 71.6% | 82.0% of 311 | ≥50% support |
| Pfam | PF02824 | TGS | 231 / 356 | 64.9% | 74.3% of 311 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 274 / 356 | 77.0% | 87.8% of 312 | ≥50% support |
| GO | GO:0006418 Biological Process | tRNA aminoacylation for protein translation | 274 / 356 | 77.0% | 87.8% of 312 | ≥50% support |
| GO | GO:0043039 Biological Process | tRNA aminoacylation | 255 / 356 | 71.6% | 81.7% of 312 | ≥50% support |
| KEGG | K01868 | TARS, thrS — Transfer RNA biogenesis | 259 / 356 | 72.8% | 97.4% of 266 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000021043.1 | EDL82978.1 | threonyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus] | Q5XHY5 Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus O | JBrowse |
| Catostylus mosaicus | ENSSJYP00000021051.1 | XP_015765232.1 | PREDICTED: threonine--tRNA ligase, cytoplasmic-like [Acropora digitifera] | Q5XHY5 Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus O | JBrowse |
| Catostylus mosaicus | ENSSJYP00000021070.1 | XP_048583342.1 | threonine--tRNA ligase 1, cytoplasmic isoform X1 [Nematostella vectensis] | Q9D0R2 Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=100 | JBrowse |
| Catostylus mosaicus | ENSSJYP00000021086.1 | XP_048583342.1 | threonine--tRNA ligase 1, cytoplasmic isoform X1 [Nematostella vectensis] | Q5XHY5 Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus O | JBrowse |
