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This orthogroup contains 296 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 296 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21483 | RNA POLYMERASE II-ASSOCIATED PROTEIN 1 | 255 / 296 | 86.2% | 98.8% of 258 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 255 / 296 | 86.2% | 98.8% of 258 | ≥80% support |
| Pfam | PF08620 | RPAP1_C — RPAP1-like, C-terminal | 181 / 296 | 61.2% | 93.8% of 193 | ≥50% support |
| Pfam | PF08621 | RPAP1_N — RPAP1-like, N-terminal | 174 / 296 | 58.8% | 90.2% of 193 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000012015.1 | XP_029211731.2 | RNA polymerase II-associated protein 1-like isoform X2 [Acropora millepora] | – | JBrowse |
| Catostylus mosaicus | ENSSJYP00000015268.1 | RMX54747.1 | hypothetical protein pdam_00020439 [Pocillopora damicornis] | Q9BWH6 RNA polymerase II-associated protein 1 OS=Homo sapiens OX=96 | JBrowse |
| Catostylus mosaicus | ENSSJYP00000015280.1 | XP_029211731.2 | RNA polymerase II-associated protein 1-like isoform X2 [Acropora millepora] | Q3T1I9 RNA polymerase II-associated protein 1 OS=Rattus norvegicus | JBrowse |
