← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 289 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12839 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 | 243 / 289 | 84.1% | 99.6% of 244 | ≥80% support |
| GO | GO:0000184 Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 243 / 289 | 84.1% | 99.6% of 244 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 243 / 289 | 84.1% | 99.6% of 244 | ≥80% support |
| GO | GO:0005844 Cellular Component | obsolete polysome | 243 / 289 | 84.1% | 99.6% of 244 | ≥80% support |
| GO | GO:0035145 Cellular Component | exon-exon junction complex | 243 / 289 | 84.1% | 99.6% of 244 | ≥80% support |
| Pfam | PF02854 | MIF4G | 213 / 289 | 73.7% | 94.7% of 225 | ≥50% support |
| Pfam | PF04050 | Upf2 — Up-frameshift suppressor 2 | 192 / 289 | 66.4% | 85.3% of 225 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 217 / 289 | 75.1% | 88.9% of 244 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 217 / 289 | 75.1% | 88.9% of 244 | ≥50% support |
| KEGG | K14327 | UPF2, RENT2 — Messenger RNA biogenesis | 181 / 289 | 62.6% | 96.3% of 188 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000007654.1 | XP_020897980.1 | regulator of nonsense transcripts 2 [Exaiptasia diaphana] | A2AT37 Regulator of nonsense transcripts 2 OS=Mus musculus OX=10090 | JBrowse |
| Catostylus mosaicus | ENSSJYP00000008387.1 | XP_047122629.1 | regulator of nonsense transcripts 2 [Hydra vulgaris] | A2AT37 Regulator of nonsense transcripts 2 OS=Mus musculus OX=10090 | JBrowse |
