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This orthogroup contains 276 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 276 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12802 | SWI/SNF COMPLEX-RELATED | 189 / 276 | 68.5% | 97.9% of 193 | ≥50% support |
| Pfam | PF16495 | SWIRM-assoc_1 — SWIRM-associated region 1 | 179 / 276 | 64.9% | 78.5% of 228 | ≥50% support |
| Pfam | PF04433 | SWIRM | 175 / 276 | 63.4% | 76.8% of 228 | ≥50% support |
| Pfam | PF00249 | Myb_DNA-binding — Myb-like DNA-binding domain | 171 / 276 | 62.0% | 75.0% of 228 | ≥50% support |
| Pfam | PF16496 | SWIRM-assoc_2 — SWIRM-associated domain at the N-terminal | 168 / 276 | 60.9% | 73.7% of 228 | ≥50% support |
| Pfam | PF16498 | SWIRM-assoc_3 — SWIRM-associated domain at the C-terminal | 163 / 276 | 59.1% | 71.5% of 228 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 188 / 276 | 68.1% | 95.4% of 197 | ≥50% support |
| GO | GO:0016514 Cellular Component | SWI/SNF complex | 188 / 276 | 68.1% | 95.4% of 197 | ≥50% support |
| GO | GO:0042393 Molecular Function | histone binding | 188 / 276 | 68.1% | 95.4% of 197 | ≥50% support |
| GO | GO:0045893 Biological Process | positive regulation of DNA-templated transcription | 188 / 276 | 68.1% | 95.4% of 197 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 176 / 276 | 63.8% | 89.3% of 197 | ≥50% support |
| KEGG | K11649 | SMARCC — Chromosome and associated proteins | 151 / 276 | 54.7% | 98.1% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000000330.1 | CAB4022278.1 | SWI SNF complex subunit SMARCC2-like, partial [Paramuricea clavata] | Q8TAQ2 SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=S | JBrowse |
| Catostylus mosaicus | ENSSJYP00000000340.1 | XP_012555972.2 | SWI/SNF complex subunit SMARCC2 [Hydra vulgaris] | Q6PDG5 SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN= | JBrowse |
| Catostylus mosaicus | ENSSJYP00000000349.1 | CAH3168343.1 | unnamed protein product [Porites evermanni] | Q8TAQ2 SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=S | JBrowse |
