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This orthogroup contains 234 genes from 134 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 234 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48034 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 198 / 234 | 84.6% | 100.0% of 198 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 198 / 234 | 84.6% | 100.0% of 198 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 200 / 234 | 85.5% | 100.0% of 200 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 198 / 234 | 84.6% | 99.0% of 200 | ≥80% support |
| GO | GO:0005681 Cellular Component | spliceosomal complex | 198 / 234 | 84.6% | 99.0% of 200 | ≥80% support |
| GO | GO:0048026 Biological Process | positive regulation of mRNA splicing, via spliceosome | 198 / 234 | 84.6% | 99.0% of 200 | ≥80% support |
| KEGG | K12897 | TRA2 — Spliceosome | 162 / 234 | 69.2% | 100.0% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000004699.1 | XP_012557524.1 | transformer-2 protein homolog beta isoform X3 [Hydra vulgaris] | Q3ZBT6 Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN= | JBrowse |
| Catostylus mosaicus | ENSSJYP00000004702.1 | XP_012557524.1 | transformer-2 protein homolog beta isoform X3 [Hydra vulgaris] | Q3ZBT6 Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN= | JBrowse |
| Catostylus mosaicus | ENSSJYP00000004713.1 | XP_012557524.1 | transformer-2 protein homolog beta isoform X3 [Hydra vulgaris] | Q3ZBT6 Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN= | JBrowse |
