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This orthogroup contains 231 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 231 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21600 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE | 196 / 231 | 84.9% | 100.0% of 196 | ≥80% support |
| Pfam | PF00849 | PseudoU_synth_2 — RNA pseudouridylate synthase | 195 / 231 | 84.4% | 100.0% of 195 | ≥80% support |
| GO | GO:0001522 Biological Process | pseudouridine synthesis | 200 / 231 | 86.6% | 100.0% of 200 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 200 / 231 | 86.6% | 100.0% of 200 | ≥80% support |
| GO | GO:0009451 Biological Process | RNA modification | 200 / 231 | 86.6% | 100.0% of 200 | ≥80% support |
| GO | GO:0009982 Molecular Function | pseudouridine synthase activity | 200 / 231 | 86.6% | 100.0% of 200 | ≥80% support |
| GO | GO:0000455 Biological Process | enzyme-directed rRNA pseudouridine synthesis | 196 / 231 | 84.9% | 98.0% of 200 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000016055.1 | XP_015761728.1 | PREDICTED: RNA pseudouridylate synthase domain-containing protein 4-like isoform X2 [Acropora digitifera] | Q4QQT0 Pseudouridylate synthase RPUSD4, mitochondrial OS=Rattus nor | JBrowse |
| Catostylus mosaicus | ENSSJYP00000016064.1 | XP_015761727.1 | PREDICTED: RNA pseudouridylate synthase domain-containing protein 4-like isoform X1 [Acropora digitifera] | Q4QQT0 Pseudouridylate synthase RPUSD4, mitochondrial OS=Rattus nor | JBrowse |
