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This orthogroup contains 224 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 224 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10822 | GLYPICAN | 201 / 224 | 89.7% | 99.5% of 202 | ≥80% support |
| Pfam | PF01153 | Glypican | 205 / 224 | 91.5% | 100.0% of 205 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 205 / 224 | 91.5% | 100.0% of 205 | ≥80% support |
| GO | GO:0009966 Biological Process | regulation of signal transduction | 205 / 224 | 91.5% | 100.0% of 205 | ≥80% support |
| GO | GO:0062023 Cellular Component | collagen-containing extracellular matrix | 205 / 224 | 91.5% | 100.0% of 205 | ≥80% support |
| GO | GO:0005576 Cellular Component | extracellular region | 201 / 224 | 89.7% | 98.1% of 205 | ≥80% support |
| GO | GO:0009986 Cellular Component | cell surface | 201 / 224 | 89.7% | 98.1% of 205 | ≥80% support |
| GO | GO:0016477 Biological Process | cell migration | 201 / 224 | 89.7% | 98.1% of 205 | ≥80% support |
| GO | GO:1905475 Biological Process | regulation of protein localization to membrane | 201 / 224 | 89.7% | 98.1% of 205 | ≥80% support |
| GO | GO:0045202 Cellular Component | synapse | 182 / 224 | 81.3% | 88.8% of 205 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000023142.1 | XP_047131106.1 | glypican-6 [Hydra vulgaris] | Q5RE54 Glypican-6 OS=Pongo abelii OX=9601 GN=GPC6 PE=2 SV=1 | JBrowse |
| Catostylus mosaicus | ENSSJYP00000023148.1 | XP_055958532.1 | glypican-6-like [Patella vulgata] | Q5RE54 Glypican-6 OS=Pongo abelii OX=9601 GN=GPC6 PE=2 SV=1 | JBrowse |
| Catostylus mosaicus | ENSSJYP00000023157.1 | XP_055958532.1 | glypican-6-like [Patella vulgata] | O75487 Glypican-4 OS=Homo sapiens OX=9606 GN=GPC4 PE=1 SV=4 | JBrowse |
