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This orthogroup contains 213 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 213 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10621 | UV EXCISION REPAIR PROTEIN RAD23 | 177 / 213 | 83.1% | 99.4% of 178 | ≥80% support |
| Pfam | PF00627 | UBA | 181 / 213 | 85.0% | 97.3% of 186 | ≥80% support |
| Pfam | PF09280 | XPC-binding | 173 / 213 | 81.2% | 93.0% of 186 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 185 / 213 | 86.9% | 98.9% of 187 | ≥80% support |
| GO | GO:0006289 Biological Process | nucleotide-excision repair | 184 / 213 | 86.4% | 98.4% of 187 | ≥80% support |
| GO | GO:0043161 Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | 181 / 213 | 85.0% | 96.8% of 187 | ≥80% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 177 / 213 | 83.1% | 94.7% of 187 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 177 / 213 | 83.1% | 94.7% of 187 | ≥80% support |
| GO | GO:0031593 Molecular Function | polyubiquitin modification-dependent protein binding | 177 / 213 | 83.1% | 94.7% of 187 | ≥80% support |
| GO | GO:0043130 Molecular Function | ubiquitin binding | 177 / 213 | 83.1% | 94.7% of 187 | ≥80% support |
| GO | GO:0070628 Molecular Function | proteasome binding | 177 / 213 | 83.1% | 94.7% of 187 | ≥80% support |
| GO | GO:0003684 Molecular Function | damaged DNA binding | 174 / 213 | 81.7% | 93.1% of 187 | ≥80% support |
| Pfam | PF00240 | ubiquitin | 156 / 213 | 73.2% | 83.9% of 186 | ≥50% support |
| KEGG | K10839 | RAD23, HR23 — DNA repair and recombination proteins | 168 / 213 | 78.9% | 98.3% of 171 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000000262.1 | PVD23252.1 | hypothetical protein C0Q70_16516 [Pomacea canaliculata] | A3KMV2 UV excision repair protein RAD23 homolog A OS=Bos taurus OX= | JBrowse |
| Catostylus mosaicus | ENSSJYP00000000274.1 | PVD23252.1 | hypothetical protein C0Q70_16516 [Pomacea canaliculata] | A3KMV2 UV excision repair protein RAD23 homolog A OS=Bos taurus OX= | JBrowse |
