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This orthogroup contains 182 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 182 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18847 | 20 KD NUCLEAR CAP BINDING PROTEIN | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 159 / 182 | 87.4% | 100.0% of 159 | ≥80% support |
| GO | GO:0000339 Molecular Function | RNA cap binding | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0005846 Cellular Component | nuclear cap binding complex | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0045292 Biological Process | mRNA cis splicing, via spliceosome | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 159 / 182 | 87.4% | 99.4% of 160 | ≥80% support |
| KEGG | K12883 | NCBP2, CBP20 — Spliceosome | 160 / 182 | 87.9% | 100.0% of 160 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catostylus mosaicus | ENSSJYP00000021008.1 | XP_012559465.1 | nuclear cap-binding protein subunit 2 [Hydra vulgaris] | Q1HE01 Nuclear cap-binding protein subunit 2 OS=Bombyx mori OX=7091 | JBrowse |
| Catostylus mosaicus | ENSSJYP00000021021.1 | XP_012564932.1 | nuclear cap-binding protein subunit 2-like [Hydra vulgaris] | B4LZ88 Nuclear cap-binding protein subunit 2B OS=Drosophila virilis | JBrowse |
