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Support counts the member genes carrying the term. % of genes is that count over all 1,759 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 1462 / 1,759 | 83.1% | 99.9% of 1,464 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1493 / 1,759 | 84.9% | 99.9% of 1,494 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1476 / 1,759 | 83.9% | 98.8% of 1,494 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g14037.t1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | Q640A2 Heterogeneous nuclear ribonucleoprotein D-like OS=Xenopus tr | JBrowse |
| Cassiopea xamachana | Cxam_g16509.t1 | XP_047142543.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Cassiopea xamachana | Cxam_g17278.t1 | XP_028405146.1 | heterogeneous nuclear ribonucleoprotein 1-like [Dendronephthya gigantea] | Q14103 Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens O | JBrowse |
| Cassiopea xamachana | Cxam_g19848.t1 | XP_029211579.1 | RNA-binding protein Musashi homolog 2-like [Acropora millepora] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Cassiopea xamachana | Cxam_g22706.t1 | KII69690.1 | Heterogeneous nuclear ribonucleoprotein A1-like 2 [Thelohanellus kitauei] | P21522 Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS | JBrowse |
| Cassiopea xamachana | Cxam_g9584.t1 | KAI5099639.1 | RNA-binding protein Musashi-like 2 isoform X9, partial [Silurus meridionalis] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
