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Support counts the member genes carrying the term. % of genes is that count over all 1,406 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | ubiquitin | 1219 / 1,406 | 86.7% | 99.5% of 1,225 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 1221 / 1,406 | 86.8% | 99.5% of 1,227 | ≥80% support |
| PANTHER | PTHR10666 | UBIQUITIN | 1076 / 1,406 | 76.5% | 88.6% of 1,214 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 1049 / 1,406 | 74.6% | 85.5% of 1,227 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0019941 Biological Process | modification-dependent protein catabolic process | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0031386 Molecular Function | protein tag activity | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0031625 Molecular Function | ubiquitin protein ligase binding | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 946 / 1,406 | 67.3% | 77.1% of 1,227 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g11635.t1 | XP_027199345.1 | NEDD8 [Dermatophagoides pteronyssinus] | P61282 Ubiquitin-like protein NEDD8 OS=Bos taurus OX=9913 GN=NEDD8 | JBrowse |
| Cassiopea xamachana | Cxam_g11861.t1 | PFX21968.1 | hypothetical protein AWC38_SpisGene13517 [Stylophora pistillata] | P79781 Ubiquitin-ribosomal protein eS31 fusion protein OS=Gallus ga | JBrowse |
| Cassiopea xamachana | Cxam_g12893.t1 | KAI8798603.1 | polyubiquitin-C [Biomphalaria glabrata] | P0CG68 Polyubiquitin-C OS=Sus scrofa OX=9823 GN=UBC PE=2 SV=1 | JBrowse |
| Cassiopea xamachana | Cxam_g16883.t1 | CAF3242144.1 | unnamed protein product [Rotaria sp. Silwood2] | P0CG53 Polyubiquitin-B OS=Bos taurus OX=9913 GN=UBB PE=1 SV=1 | JBrowse |
| Cassiopea xamachana | Cxam_g17913.t1 | RYH28482.1 | ubiquitin [archaeon] | – | JBrowse |
| Cassiopea xamachana | Cxam_g19426.t1 | none | – | JBrowse | |
| Cassiopea xamachana | Cxam_g20729.t1 | PAA79594.1 | hypothetical protein BOX15_Mlig001135g4 [Macrostomum lignano] | P23398 Polyubiquitin (Fragment) OS=Strongylocentrotus purpuratus OX | JBrowse |
| Cassiopea xamachana | Cxam_g24667.t1 | KFM57633.1 | Ubiquitin-like protein 4A, partial [Stegodyphus mimosarum] | – | JBrowse |
