← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 1,156 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30047 | HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED | 1043 / 1,156 | 90.2% | 100.0% of 1,043 | ≥80% support |
| Pfam | PF02028 | BCCT | 1042 / 1,156 | 90.1% | 99.6% of 1,046 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 1044 / 1,156 | 90.3% | 100.0% of 1,044 | ≥80% support |
| GO | GO:0022857 Molecular Function | transmembrane transporter activity | 1044 / 1,156 | 90.3% | 100.0% of 1,044 | ≥80% support |
| GO | GO:0071705 Biological Process | nitrogen compound transport | 1044 / 1,156 | 90.3% | 100.0% of 1,044 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 1043 / 1,156 | 90.2% | 99.9% of 1,044 | ≥80% support |
| GO | GO:0006810 Biological Process | transport | 1043 / 1,156 | 90.2% | 99.9% of 1,044 | ≥80% support |
| GO | GO:0016021 Cellular Component | membrane | 1043 / 1,156 | 90.2% | 99.9% of 1,044 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g1061.t1 | WP_170331336.1 | BCCT family transporter [Ruegeria arenilitoris] | Q87NZ5 Glycine betaine/proline/choline transporter VP1723 OS=Vibrio | JBrowse |
| Cassiopea xamachana | Cxam_g2039.t1 | WP_085821556.1 | BCCT family transporter [Ruegeria meonggei] | P54417 Glycine betaine transporter OpuD OS=Bacillus subtilis (strai | JBrowse |
| Cassiopea xamachana | Cxam_g227.t1 | WP_209195498.1 | MULTISPECIES: BCCT family transporter [unclassified Ruegeria] | Q87NZ5 Glycine betaine/proline/choline transporter VP1723 OS=Vibrio | JBrowse |
| Cassiopea xamachana | Cxam_g2735.t1 | RMX60086.1 | hypothetical protein pdam_00004533 [Pocillopora damicornis] | Q87PP5 Glycine betaine/proline/choline/ectoine transporter VP1456 O | JBrowse |
| Cassiopea xamachana | Cxam_g29571.t1 | XP_020608608.1 | uncharacterized protein LOC110047199 [Orbicella faveolata] | P45335 Uncharacterized transporter HI_1706 OS=Haemophilus influenza | JBrowse |
| Cassiopea xamachana | Cxam_g29762.t1 | KAJ7373471.1 | hypothetical protein OS493_011063 [Desmophyllum pertusum] | Q87PP5 Glycine betaine/proline/choline/ectoine transporter VP1456 O | JBrowse |
| Cassiopea xamachana | Cxam_g6185.t1 | WP_170403140.1 | BCCT family transporter [Ruegeria arenilitoris] | A0A0B5RUB0 Trimethylamine transporter OS=Myroides profundi OX=480520 GN | JBrowse |
| Cassiopea xamachana | Cxam_g6699.t1 | XP_020620548.1 | uncharacterized protein LOC110058271 [Orbicella faveolata] | P45335 Uncharacterized transporter HI_1706 OS=Haemophilus influenza | JBrowse |
