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Support counts the member genes carrying the term. % of genes is that count over all 463 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21725 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 | 381 / 463 | 82.3% | 98.7% of 386 | ≥80% support |
| Pfam | PF13764 | E3_UbLigase_R4 — E3 ubiquitin-protein ligase UBR4 | 258 / 463 | 55.7% | 70.7% of 365 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g10397.t1 | CAH3188915.1 | unnamed protein product [Porites evermanni] | Q2TL32 E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=101 | JBrowse |
| Cassiopea xamachana | Cxam_g10398.t1 | CDQ88956.1 | unnamed protein product [Oncorhynchus mykiss] | A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN | JBrowse |
| Cassiopea xamachana | Cxam_g19060.t1 | XP_050389975.2 | E3 ubiquitin-protein ligase UBR4 [Patella vulgata] | Q5T4S7 E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Cassiopea xamachana | Cxam_g29758.t1 | XP_015761151.1 | PREDICTED: E3 ubiquitin-protein ligase UBR4-like, partial [Acropora digitifera] | A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN | JBrowse |
| Cassiopea xamachana | Cxam_g29865.t1 | XP_047134257.1 | E3 ubiquitin-protein ligase UBR4 isoform X3 [Hydra vulgaris] | A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN | JBrowse |
| Cassiopea xamachana | Cxam_g4431.t1 | XP_047134257.1 | E3 ubiquitin-protein ligase UBR4 isoform X3 [Hydra vulgaris] | Q2TL32 E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=101 | JBrowse |
| Cassiopea xamachana | Cxam_g6736.t1 | XP_047134257.1 | E3 ubiquitin-protein ligase UBR4 isoform X3 [Hydra vulgaris] | Q5T4S7 E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Cassiopea xamachana | Cxam_g8211.t1 | XP_047134257.1 | E3 ubiquitin-protein ligase UBR4 isoform X3 [Hydra vulgaris] | – | JBrowse |
| Cassiopea xamachana | Cxam_g8904.t1 | PIO28832.1 | hypothetical protein AB205_0014230 [Lithobates catesbeianus] | A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN | JBrowse |
