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Support counts the member genes carrying the term. % of genes is that count over all 251 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00075 | RNase_H — RNase H | 202 / 251 | 80.5% | 93.1% of 217 | ≥80% support |
| GO | GO:0004523 Molecular Function | RNA-DNA hybrid ribonuclease activity | 207 / 251 | 82.5% | 97.2% of 213 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 206 / 251 | 82.1% | 96.7% of 213 | ≥80% support |
| PANTHER | PTHR10642 | RIBONUCLEASE H1 | 199 / 251 | 79.3% | 97.1% of 205 | ≥50% support |
| Pfam | PF01693 | Cauli_VI — Caulimovirus viroplasmin | 168 / 251 | 66.9% | 77.4% of 217 | ≥50% support |
| GO | GO:0043137 Biological Process | DNA replication, removal of RNA primer | 199 / 251 | 79.3% | 93.4% of 213 | ≥50% support |
| GO | GO:0090502 Biological Process | obsolete RNA phosphodiester bond hydrolysis, endonucleolytic | 199 / 251 | 79.3% | 93.4% of 213 | ≥50% support |
| GO | GO:0000287 Molecular Function | magnesium ion binding | 140 / 251 | 55.8% | 65.7% of 213 | ≥50% support |
| KEGG | K03469 | rnhA, RNASEH1 — DNA replication proteins | 160 / 251 | 63.8% | 98.8% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g17084.t1 | XP_054856020.1 | ribonuclease H1 isoform X2 [Eublepharis macularius] | Q5BK46 Ribonuclease H1 OS=Rattus norvegicus OX=10116 GN=Rnaseh1 PE= | JBrowse |
| Cassiopea xamachana | Cxam_g2116.t1 | WP_170431161.1 | alpha/beta hydrolase [Ruegeria arenilitoris] | Q5LNJ2 Ribonuclease H OS=Ruegeria pomeroyi (strain ATCC 700808 / DS | JBrowse |
| Cassiopea xamachana | Cxam_g5673.t1 | HIF06716.1 | ribonuclease HI [Gemmatimonadota bacterium] | Q1GDG1 Ribonuclease H OS=Ruegeria sp. (strain TM1040) OX=292414 GN= | JBrowse |
