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Support counts the member genes carrying the term. % of genes is that count over all 211 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR32071 | TRANSCRIPTIONAL REGULATORY PROTEIN | 199 / 211 | 94.3% | 96.6% of 206 | ≥80% support |
| Pfam | PF00158 | Sigma54_activat — Sigma-54 interaction domain | 197 / 211 | 93.4% | 94.7% of 208 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 183 / 211 | 86.7% | 88.8% of 206 | ≥80% support |
| Pfam | PF02954 | HTH_8 — Bacterial regulatory protein, Fis family | 154 / 211 | 73.0% | 74.0% of 208 | ≥50% support |
| Pfam | PF00072 | Response_reg — Response regulator receiver domain | 119 / 211 | 56.4% | 57.2% of 208 | ≥50% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 154 / 211 | 73.0% | 74.8% of 206 | ≥50% support |
| GO | GO:0000160 Biological Process | phosphorelay signal transduction system | 127 / 211 | 60.2% | 61.7% of 206 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g10112.t1 | MAG58157.1 | DNA-binding response regulator [Planctomycetota bacterium] | P05407 Nif-specific regulatory protein OS=Bradyrhizobium diazoeffic | JBrowse |
| Cassiopea xamachana | Cxam_g10114.t1 | MBX6315432.1 | sigma-54-dependent Fis family transcriptional regulator [Isosphaeraceae bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g10126.t1 | MCA9234385.1 | SpoIIE family protein phosphatase [Planctomycetales bacterium] | – | JBrowse |
| Cassiopea xamachana | Cxam_g10786.t1 | MCI0585201.1 | sigma-54 dependent transcriptional regulator [Planctomycetota bacterium] | P25852 Transcriptional regulatory protein ZraR OS=Salmonella typhim | JBrowse |
| Cassiopea xamachana | Cxam_g11042.t1 | MBN2492823.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g1136.t1 | WP_170329949.1 | sigma-54 dependent transcriptional regulator [Ruegeria arenilitoris] | Q9HU19 C4-dicarboxylate transport transcriptional regulatory protei | JBrowse |
| Cassiopea xamachana | Cxam_g11548.t1 | MBN2490304.1 | FHA domain-containing protein [Planctomycetota bacterium] | – | JBrowse |
| Cassiopea xamachana | Cxam_g11550.t1 | MBN2490740.1 | sigma 54-interacting transcriptional regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g1190.t1 | WP_170324832.1 | sigma-54 dependent transcriptional regulator [Ruegeria arenilitoris] | P13632 C4-dicarboxylate transport transcriptional regulatory protei | JBrowse |
| Cassiopea xamachana | Cxam_g13016.t1 | MBN2491203.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q9APD9 Transcriptional regulatory protein ZraR OS=Klebsiella oxytoc | JBrowse |
| Cassiopea xamachana | Cxam_g13870.t1 | MBN2492809.1 | hybrid sensor histidine kinase/response regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g14466.t1 | WP_066726666.1 | sigma 54-interacting transcriptional regulator [Desulfuromonas sp. DDH964] | P25852 Transcriptional regulatory protein ZraR OS=Salmonella typhim | JBrowse |
| Cassiopea xamachana | Cxam_g15512.t1 | MBN2492790.1 | response regulator [Planctomycetota bacterium] | A0A0H2ZN37 Transcriptional regulatory protein WalR OS=Streptococcus pne | JBrowse |
| Cassiopea xamachana | Cxam_g16861.t1 | WP_161540386.1 | sigma 54-interacting transcriptional regulator [Rhodothermus marinus] | P12626 Nitrogen fixation protein AnfA OS=Azotobacter vinelandii OX= | JBrowse |
| Cassiopea xamachana | Cxam_g17787.t1 | MBL9076272.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q9APD9 Transcriptional regulatory protein ZraR OS=Klebsiella oxytoc | JBrowse |
| Cassiopea xamachana | Cxam_g17788.t1 | MBN2490529.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g20238.t1 | MBN2490791.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g20895.t1 | MBN2492143.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
| Cassiopea xamachana | Cxam_g2237.t1 | WP_170326938.1 | YcjX family protein [Ruegeria arenilitoris] | P76046 Ras-like GTPase YcjX OS=Escherichia coli (strain K12) OX=833 | JBrowse |
| Cassiopea xamachana | Cxam_g25451.t1 | MBN2492808.1 | sigma-54-dependent Fis family transcriptional regulator [Planctomycetota bacterium] | Q06065 Regulatory protein AtoC OS=Escherichia coli (strain K12) OX= | JBrowse |
