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Support counts the member genes carrying the term. % of genes is that count over all 74 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00072 | Response_reg — Response regulator receiver domain | 64 / 74 | 86.5% | 91.4% of 70 | ≥80% support |
| GO | GO:0000160 Biological Process | phosphorelay signal transduction system | 66 / 74 | 89.2% | 95.7% of 69 | ≥80% support |
| PANTHER | PTHR43214 | TWO-COMPONENT RESPONSE REGULATOR | 42 / 74 | 56.8% | 60.9% of 69 | ≥50% support |
| Pfam | PF00196 | GerE — Bacterial regulatory proteins, luxR family | 52 / 74 | 70.3% | 74.3% of 70 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 56 / 74 | 75.7% | 81.2% of 69 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 49 / 74 | 66.2% | 71.0% of 69 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g10470.t1 | HHJ20560.1 | FIST domain containing protein [Gammaproteobacteria bacterium] | – | JBrowse |
| Cassiopea xamachana | Cxam_g10489.t1 | MCS6951870.1 | response regulator transcription factor [Bryobacteraceae bacterium] | O32197 Transcriptional regulatory protein LiaR OS=Bacillus subtilis | JBrowse |
| Cassiopea xamachana | Cxam_g13579.t1 | WP_170335216.1 | FIST N-terminal domain-containing protein [Ruegeria arenilitoris] | P29369 Glycerol metabolism activator OS=Pseudomonas aeruginosa (str | JBrowse |
| Cassiopea xamachana | Cxam_g14533.t1 | MCL4310726.1 | response regulator transcription factor [Actinomycetota bacterium] | P54662 Transcriptional regulatory protein DegU OS=Brevibacillus bre | JBrowse |
| Cassiopea xamachana | Cxam_g1553.t1 | WP_170399674.1 | response regulator transcription factor [Ruegeria arenilitoris] | Q1M7A0 Transcriptional regulatory protein MctR OS=Rhizobium johnsto | JBrowse |
| Cassiopea xamachana | Cxam_g2658.t1 | MBN1796534.1 | response regulator transcription factor [Sedimentisphaerales bacterium] | Q8CN75 Oxygen regulatory protein NreC OS=Staphylococcus epidermidis | JBrowse |
| Cassiopea xamachana | Cxam_g2659.t1 | MAE67208.1 | DNA-binding response regulator [Phycisphaeraceae bacterium] | P13800 Transcriptional regulatory protein DegU OS=Bacillus subtilis | JBrowse |
| Cassiopea xamachana | Cxam_g3363.t1 | WP_170406529.1 | FIST N-terminal domain-containing protein [Ruegeria arenilitoris] | A8R3T0 Glycerol metabolism activator OS=Pseudomonas putida OX=303 G | JBrowse |
| Cassiopea xamachana | Cxam_g7840.t1 | MCF6245851.1 | response regulator transcription factor [Desulfobacula sp.] | Q1M7A0 Transcriptional regulatory protein MctR OS=Rhizobium johnsto | JBrowse |
