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Support counts the member genes carrying the term. % of genes is that count over all 62 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF04300 | FBA — F-box associated region | 52 / 62 | 83.9% | 96.3% of 54 | ≥80% support |
| PANTHER | PTHR12125 | F-BOX ONLY PROTEIN 6-LIKE PROTEIN | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
| GO | GO:0006516 Biological Process | glycoprotein catabolic process | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
| GO | GO:0019005 Cellular Component | SCF ubiquitin ligase complex | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
| GO | GO:0030433 Biological Process | obsolete ubiquitin-dependent ERAD pathway | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
| GO | GO:0031146 Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 49 / 62 | 79.0% | 96.1% of 51 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g22330.t1 | XP_052275690.1 | uncharacterized protein LOC127875003 [Dreissena polymorpha] | Q80UW2 F-box only protein 2 OS=Mus musculus OX=10090 GN=Fbxo2 PE=1 | JBrowse |
| Cassiopea xamachana | Cxam_g25465.t1 | XP_001371664.1 | PREDICTED: F-box only protein 6-like [Monodelphis domestica] | Q3SX24 F-box only protein 6 OS=Bos taurus OX=9913 GN=FBXO6 PE=1 SV= | JBrowse |
