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Support counts the member genes carrying the term. % of genes is that count over all 35 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00589 | Phage_integrase — Phage integrase family | 30 / 35 | 85.7% | 90.9% of 33 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 31 / 35 | 88.6% | 93.9% of 33 | ≥80% support |
| GO | GO:0015074 Biological Process | DNA integration | 31 / 35 | 88.6% | 93.9% of 33 | ≥80% support |
| GO | GO:0006310 Biological Process | DNA recombination | 30 / 35 | 85.7% | 90.9% of 33 | ≥80% support |
| PANTHER | PTHR30349 | PHAGE INTEGRASE-RELATED | 25 / 35 | 71.4% | 83.3% of 30 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g14693.t1 | MCB9492556.1 | tyrosine-type recombinase/integrase [Dehalococcoidia bacterium] | A7NFG3 Tyrosine recombinase XerC OS=Roseiflexus castenholzii (strai | JBrowse |
| Cassiopea xamachana | Cxam_g15771.t1 | MBK8975265.1 | integron integrase [Planctomycetota bacterium] | P62590 Integrase/recombinase OS=Escherichia coli OX=562 GN=int PE=3 | JBrowse |
| Cassiopea xamachana | Cxam_g18085.t1 | MBN2490776.1 | tyrosine recombinase XerC [Planctomycetota bacterium] | B2A335 Tyrosine recombinase XerC OS=Natranaerobius thermophilus (st | JBrowse |
| Cassiopea xamachana | Cxam_g2245.t1 | WP_254438009.1 | tyrosine recombinase XerC [Ruegeria arenilitoris] | Q8UC70 Tyrosine recombinase XerC OS=Agrobacterium fabrum (strain C5 | JBrowse |
| Cassiopea xamachana | Cxam_g24.t1 | MBL8860746.1 | phage integrase family protein [Planctomycetota bacterium] | Q8KET0 Tyrosine recombinase XerD OS=Chlorobaculum tepidum (strain A | JBrowse |
