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Support counts the member genes carrying the term. % of genes is that count over all 9 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00196 | GerE — Bacterial regulatory proteins, luxR family | 9 / 9 | 100.0% | 100.0% of 9 | 100% consensus |
| GO | GO:0003677 Molecular Function | DNA binding | 9 / 9 | 100.0% | 100.0% of 9 | 100% consensus |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 9 / 9 | 100.0% | 100.0% of 9 | 100% consensus |
| PANTHER | PTHR44688 | - | 5 / 9 | 55.6% | 100.0% of 5 | ≥50% support |
| Pfam | PF03472 | Autoind_bind — Autoinducer binding domain | 7 / 9 | 77.8% | 77.8% of 9 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g10584.t1 | WP_108862286.1 | autoinducer binding domain-containing protein [Ruegeria sp. Alg231-54] | – | JBrowse |
| Cassiopea xamachana | Cxam_g2537.t1 | WP_170325296.1 | autoinducer binding domain-containing protein [Ruegeria arenilitoris] | P25084 Transcriptional activator protein LasR OS=Pseudomonas aerugi | JBrowse |
| Cassiopea xamachana | Cxam_g3978.t1 | WP_170417956.1 | MULTISPECIES: LuxR family transcriptional regulator [Ruegeria] | – | JBrowse |
