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Support counts the member genes carrying the term. % of genes is that count over all 3 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR43133 | RNA POLYMERASE ECF-TYPE SIGMA FACTO | 3 / 3 | 100.0% | 100.0% of 3 | 100% consensus |
| Pfam | PF04542 | Sigma70_r2 — Sigma-70 region 2 | 3 / 3 | 100.0% | 100.0% of 3 | 100% consensus |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 3 / 3 | 100.0% | 100.0% of 3 | 100% consensus |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 3 / 3 | 100.0% | 100.0% of 3 | 100% consensus |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 3 / 3 | 100.0% | 100.0% of 3 | 100% consensus |
| GO | GO:0016987 Molecular Function | sigma factor activity | 3 / 3 | 100.0% | 100.0% of 3 | 100% consensus |
| Pfam | PF08281 | Sigma70_r4_2 — Sigma-70, region 4 | 2 / 3 | 66.7% | 66.7% of 3 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 2 / 3 | 66.7% | 66.7% of 3 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g11337.t1 | MAG57720.1 | hypothetical protein [Planctomycetota bacterium] | – | JBrowse |
| Cassiopea xamachana | Cxam_g4573.t1 | MYE47751.1 | sigma-70 family RNA polymerase sigma factor [Chloroflexota bacterium] | Q3IYV6 ECF RNA polymerase sigma factor RpoE OS=Cereibacter sphaeroi | JBrowse |
