← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 303 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14190 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 | 262 / 303 | 86.5% | 100.0% of 262 | ≥80% support |
| GO | GO:0000938 Cellular Component | GARP complex | 262 / 303 | 86.5% | 100.0% of 262 | ≥80% support |
| GO | GO:0006896 Biological Process | Golgi to vacuole transport | 262 / 303 | 86.5% | 100.0% of 262 | ≥80% support |
| GO | GO:0019905 Molecular Function | syntaxin binding | 262 / 303 | 86.5% | 100.0% of 262 | ≥80% support |
| GO | GO:0032456 Biological Process | endocytic recycling | 262 / 303 | 86.5% | 100.0% of 262 | ≥80% support |
| GO | GO:0042147 Biological Process | retrograde transport, endosome to Golgi | 262 / 303 | 86.5% | 100.0% of 262 | ≥80% support |
| GO | GO:0007041 Biological Process | lysosomal transport | 258 / 303 | 85.2% | 98.5% of 262 | ≥80% support |
| Pfam | PF20655 | Vps52_C — Vps52, C-terminal | 233 / 303 | 76.9% | 92.5% of 252 | ≥50% support |
| Pfam | PF04129 | Vps52_CC — Vps52/Sac2 family, coiled-coil | 191 / 303 | 63.0% | 75.8% of 252 | ≥50% support |
| KEGG | K20298 | VPS52 — Membrane trafficking | 175 / 303 | 57.8% | 98.3% of 178 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Duncanopsammia axifuga | ENSXFYP00000024005.1 | XP_020626964.1 | LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog [Orbicella faveolata] | Q8N1B4 Vacuolar protein sorting-associated protein 52 homolog OS=Ho | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000024015.1 | XP_015774461.1 | PREDICTED: vacuolar protein sorting-associated protein 52 homolog isoform X2 [Acropora digitifera] | Q8N1B4 Vacuolar protein sorting-associated protein 52 homolog OS=Ho | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000024029.1 | XP_029214236.1 | vacuolar protein sorting-associated protein 52 homolog [Acropora millepora] | Q8N1B4 Vacuolar protein sorting-associated protein 52 homolog OS=Ho | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000051270.1 | KAJ7370909.1 | Vacuolar protein sorting-associated protein 52 [Desmophyllum pertusum] | Q5TJF0 Vacuolar protein sorting-associated protein 52 homolog OS=Ca | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000051280.1 | KAJ7370909.1 | Vacuolar protein sorting-associated protein 52 [Desmophyllum pertusum] | Q5TJF0 Vacuolar protein sorting-associated protein 52 homolog OS=Ca | JBrowse |
