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This orthogroup contains 249 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 249 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 204 / 249 | 81.9% | 96.2% of 212 | ≥80% support |
| Pfam | PF00270 | DEAD | 201 / 249 | 80.7% | 94.8% of 212 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 212 / 249 | 85.1% | 98.6% of 215 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 211 / 249 | 84.7% | 98.1% of 215 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 204 / 249 | 81.9% | 94.9% of 215 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 204 / 249 | 81.9% | 94.9% of 215 | ≥80% support |
| GO | GO:0005681 Cellular Component | spliceosomal complex | 204 / 249 | 81.9% | 94.9% of 215 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 201 / 249 | 80.7% | 93.5% of 215 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 183 / 249 | 73.5% | 86.3% of 212 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 147 / 249 | 59.0% | 68.4% of 215 | ≥50% support |
| KEGG | K13116 | DDX41, ABS — Spliceosome | 159 / 249 | 63.9% | 97.0% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Duncanopsammia axifuga | ENSXFYP00000000585.1 | XP_020625703.1 | probable ATP-dependent RNA helicase DDX41 [Orbicella faveolata] | Q91VN6 Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus OX | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000000599.1 | CAH3033510.1 | unnamed protein product [Porites lobata] | Q9UJV9 Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX | JBrowse |
