← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Dendrophyllia cribrosa | BRAKERRLHP00000000355.1 | CAH3016453.1 | unnamed protein product [Porites evermanni] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000000509.1 | CAH3035184.1 | unnamed protein product [Porites lobata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000000577.1 | CAH3117121.1 | unnamed protein product [Porites lobata] | Q90XN9 Homeobox protein HMX3-B OS=Oryzias latipes OX=8090 GN=hmx3b | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000001198.1 | CAH3125502.1 | unnamed protein product [Porites lobata] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000001502.1 | CAH3125601.1 | unnamed protein product [Porites lobata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000001654.1 | CAH3188213.1 | unnamed protein product [Porites evermanni] | Q60554 Homeobox protein Nkx-6.1 OS=Mesocricetus auratus OX=10036 GN | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000002708.1 | KAJ7392404.1 | hypothetical protein OS493_012066 [Desmophyllum pertusum] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000002741.1 | CAH3125653.1 | unnamed protein product [Porites lobata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000003144.1 | CAH3142268.1 | unnamed protein product [Pocillopora meandrina] | P28361 Homeobox protein MSX-1 OS=Gallus gallus OX=9031 GN=MSX1 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000003637.1 | CAH3015005.1 | unnamed protein product [Porites evermanni] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000003845.1 | CAH3125599.1 | unnamed protein product [Porites lobata] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000004347.1 | XP_020614135.1 | homeobox protein slou-like [Orbicella faveolata] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000004513.1 | CAH3117200.1 | unnamed protein product [Porites lobata] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000004808.1 | XP_020612724.1 | homeobox protein ceh-30-like [Orbicella faveolata] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000009991.1 | KAJ7381300.1 | hypothetical protein OS493_001421 [Desmophyllum pertusum] | Q3UHX8 Homeobox protein Nkx-6.3 OS=Mus musculus OX=10090 GN=Nkx6-3 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000010264.1 | CAH3178045.1 | unnamed protein product [Porites lobata] | P43687 Homeobox protein HMX2 OS=Mus musculus OX=10090 GN=Hmx2 PE=2 | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000010288.1 | KAJ7378109.1 | hypothetical protein OS493_024774 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000011403.1 | CAH3184595.1 | unnamed protein product [Porites evermanni] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000012868.1 | CAH3194434.1 | unnamed protein product, partial [Porites evermanni] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Dendrophyllia cribrosa | BRAKERRLHP00000015197.1 | KAJ7393715.1 | ESX homeobox 1 [Desmophyllum pertusum] | P17487 Homeobox protein ceh-12 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
