← Back to the gene family browser
This orthogroup contains 154 genes from 56 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 154 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 118 / 154 | 76.6% | 100.0% of 118 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 119 / 154 | 77.3% | 100.0% of 119 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 108 / 154 | 70.1% | 90.8% of 119 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 104 / 154 | 67.5% | 87.4% of 119 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 100 / 154 | 64.9% | 84.0% of 119 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 99 / 154 | 64.3% | 83.2% of 119 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7314874.1 | KAJ7314874.1 | hypothetical protein OS493_039088 [Desmophyllum pertusum] | P70436 Homeobox protein DLX-4 OS=Mus musculus OX=10090 GN=Dlx4 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7314875.1 | KAJ7314875.1 | hypothetical protein OS493_039089 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7314876.1 | KAJ7314876.1 | hypothetical protein OS493_039090 [Desmophyllum pertusum] | P70436 Homeobox protein DLX-4 OS=Mus musculus OX=10090 GN=Dlx4 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7314877.1 | KAJ7314877.1 | hypothetical protein OS493_039091 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7381245.1 | KAJ7381245.1 | hypothetical protein OS493_001361 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7381246.1 | KAJ7381246.1 | hypothetical protein OS493_001363 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7381247.1 | KAJ7381247.1 | hypothetical protein OS493_001364 [Desmophyllum pertusum] | P70436 Homeobox protein DLX-4 OS=Mus musculus OX=10090 GN=Dlx4 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7391834.1 | KAJ7391834.1 | hypothetical protein OS493_016124 [Desmophyllum pertusum] | P09634 Homeobox protein Hox-A7 (Fragment) OS=Rattus norvegicus OX=1 | JBrowse |
