← Back to the gene family browser
This orthogroup contains 154 genes from 56 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 154 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 118 / 154 | 76.6% | 100.0% of 118 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 119 / 154 | 77.3% | 100.0% of 119 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 108 / 154 | 70.1% | 90.8% of 119 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 104 / 154 | 67.5% | 87.4% of 119 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 100 / 154 | 64.9% | 84.0% of 119 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 99 / 154 | 64.3% | 83.2% of 119 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia equina | EGACTEQ4350002500-PA | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350016943-PA | XP_031575220.1 | homeobox protein DBX2-like [Actinia tenebrosa] | P54366 Homeobox protein goosecoid OS=Drosophila melanogaster OX=722 | JBrowse |
| Actinia equina | EGACTEQ4350023175-PA | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350027849-PA | XP_020893401.1 | homeobox protein Dlx4a [Exaiptasia diaphana] | – | JBrowse |
| Actinia equina | EGACTEQ4350030534-PA | XP_031575220.1 | homeobox protein DBX2-like [Actinia tenebrosa] | P54366 Homeobox protein goosecoid OS=Drosophila melanogaster OX=722 | JBrowse |
| Actinia equina | EGACTEQ4350045671-PA | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | – | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26534 | none | – | JBrowse | |
| Actinoscyphia liui | gene10678.t1 | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | P53547 Homeobox protein ceh-1 (Fragment) OS=Caenorhabditis elegans | JBrowse |
| Actinia mediterranea | ENSQPTP00000000029.1 | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia mediterranea | ENSQPTP00000044137.1 | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | – | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027075.1 | CAH3193465.1 | unnamed protein product, partial [Porites evermanni] | P20009 Homeotic protein distal-less OS=Drosophila melanogaster OX=7 | JBrowse |
| Astreopora myriophthalma | g10831.t1.1 | none | – | JBrowse | |
| Astrangia poculata | evm.model.Ap7.2833 | XP_020616438.1 | retina and anterior neural fold homeobox protein 2-like [Orbicella faveolata] | A6NJG6 Arginine-fifty homeobox OS=Homo sapiens OX=9606 GN=ARGFX PE= | JBrowse |
| Astrangia poculata | evm.model.Ap7.942 | XP_020618276.1 | homeobox protein Nkx-6.3-like [Orbicella faveolata] | – | JBrowse |
| Actinernus sp. WN-2022 | Acti_009405-T1 | none | – | JBrowse | |
| Actinernus sp. WN-2022 | Acti_035605-T1 | none | – | JBrowse | |
| Actinernus sp. WN-2022 | Acti_038982-T1 | none | – | JBrowse | |
| Actinernus sp. WN-2022 | Acti_042138-T1 | none | – | JBrowse | |
| Actinia tenebrosa | XP_031572048.1 | XP_031572048.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | – | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000010250.1 | XP_031575220.1 | homeobox protein DBX2-like [Actinia tenebrosa] | P54366 Homeobox protein goosecoid OS=Drosophila melanogaster OX=722 | JBrowse |
