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Support counts the member genes carrying the term. % of genes is that count over all 158 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13070 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED | 136 / 158 | 86.1% | 100.0% of 136 | ≥80% support |
| Pfam | PF01974 | tRNA_int_endo — tRNA intron endonuclease, catalytic C-terminal domain | 133 / 158 | 84.2% | 100.0% of 133 | ≥80% support |
| GO | GO:0000213 Molecular Function | tRNA-intron endonuclease activity | 136 / 158 | 86.1% | 100.0% of 136 | ≥80% support |
| GO | GO:0000379 Biological Process | tRNA-type intron splice site recognition and cleavage | 136 / 158 | 86.1% | 100.0% of 136 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 135 / 158 | 85.4% | 99.3% of 136 | ≥80% support |
| GO | GO:0006388 Biological Process | tRNA splicing, via endonucleolytic cleavage and ligation | 133 / 158 | 84.2% | 97.8% of 136 | ≥80% support |
| KEGG | K15323 | TSEN34 — Transfer RNA biogenesis | 123 / 158 | 77.9% | 100.0% of 123 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000008545.1 | CAB3984397.1 | tRNA-splicing endonuclease subunit Sen34-like [Paramuricea clavata] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |