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Support counts the member genes carrying the term. % of genes is that count over all 158 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13070 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED | 136 / 158 | 86.1% | 100.0% of 136 | ≥80% support |
| Pfam | PF01974 | tRNA_int_endo — tRNA intron endonuclease, catalytic C-terminal domain | 133 / 158 | 84.2% | 100.0% of 133 | ≥80% support |
| GO | GO:0000213 Molecular Function | tRNA-intron endonuclease activity | 136 / 158 | 86.1% | 100.0% of 136 | ≥80% support |
| GO | GO:0000379 Biological Process | tRNA-type intron splice site recognition and cleavage | 136 / 158 | 86.1% | 100.0% of 136 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 135 / 158 | 85.4% | 99.3% of 136 | ≥80% support |
| GO | GO:0006388 Biological Process | tRNA splicing, via endonucleolytic cleavage and ligation | 133 / 158 | 84.2% | 97.8% of 136 | ≥80% support |
| KEGG | K15323 | TSEN34 — Transfer RNA biogenesis | 123 / 158 | 77.9% | 100.0% of 123 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0057.g68.t1 | XP_015761992.1 | PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Acropora digitifera] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Alatina alata | Aala_g1299.t1 | XP_037804046.1 | craniofacial development protein 2-like [Penaeus monodon] | O02751 Craniofacial development protein 2 OS=Bos taurus OX=9913 GN= | JBrowse |
| Aurelia aurita | scaffold73.g59.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold259.g23.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000014710.1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q9BSV6 tRNA-splicing endonuclease subunit Sen34 OS=Homo sapiens OX= | JBrowse |
| Acropora austera | ENSKKQP00000014717.1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q9BSV6 tRNA-splicing endonuclease subunit Sen34 OS=Homo sapiens OX= | JBrowse |
| Acropora awi | aawi_s0136.g30.t1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora cervicornis | KAK2568691.1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Aurelia coerulea | evm.model.ptg000011l.239 | XP_020603440.1 | tRNA-splicing endonuclease subunit Sen34-like [Orbicella faveolata] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora cytherea | acyt_s1173.g4.t1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora digitifera | chr14Alt.g29669.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0005.g313.t1 | XP_015761994.1 | PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Acropora digitifera] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Actinia equina | EGACTEQ4350038811-PA | XP_031557852.1 | probable tRNA-splicing endonuclease subunit sen34 [Actinia tenebrosa] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora florida | aflo_s0029.g60.t1 | XP_015761994.1 | PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Acropora digitifera] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora gemmifera | agem_s0104.g113.t1 | XP_015761994.1 | PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Acropora digitifera] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora hemprichii | Ahemp_018047-T1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora hyacinthus | ahya_s0051.g72.t1 | XP_015761994.1 | PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Acropora digitifera] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g14212 | XP_020901940.1 | tRNA-splicing endonuclease subunit Sen34 [Exaiptasia diaphana] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Acropora intermedia | aint_s0319.g27.t1 | XP_029195009.2 | tRNA-splicing endonuclease subunit Sen34-like [Acropora millepora] | Q8BMZ5 tRNA-splicing endonuclease subunit Sen34 OS=Mus musculus OX= | JBrowse |
| Actinoscyphia liui | gene19725.t1 | XP_020901940.1 | tRNA-splicing endonuclease subunit Sen34 [Exaiptasia diaphana] | Q9BSV6 tRNA-splicing endonuclease subunit Sen34 OS=Homo sapiens OX= | JBrowse |
