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This orthogroup contains 4,389 genes from 130 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 4,389 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR19277 | PENTRAXIN | 3793 / 4,389 | 86.4% | 97.4% of 3,896 | ≥80% support |
| Pfam | PF00354 | Pentaxin | 3646 / 4,389 | 83.1% | 91.8% of 3,972 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hemicorallium imperiale | evm.model.Chr01.294 | CAH3168320.1 | unnamed protein product, partial [Pocillopora meandrina] | P0C6B8 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Hemicorallium imperiale | evm.model.Chr07.641 | XP_028396178.1 | neuronal pentraxin-1-like [Dendronephthya gigantea] | Q15818 Neuronal pentraxin-1 OS=Homo sapiens OX=9606 GN=NPTX1 PE=1 S | JBrowse |
| Hemicorallium imperiale | evm.model.Chr07.707_evm.model.Chr07.708 | XP_028396328.1 | neuronal pentraxin-1-like [Dendronephthya gigantea] | P06206 C-reactive protein 1.4 OS=Limulus polyphemus OX=6850 PE=1 SV | JBrowse |
| Hemicorallium imperiale | evm.model.Chr08.229 | XP_028396328.1 | neuronal pentraxin-1-like [Dendronephthya gigantea] | Q4LDE5 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Hemicorallium imperiale | evm.model.Chr11.441 | CAH3168320.1 | unnamed protein product, partial [Pocillopora meandrina] | P0C6B8 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Hemicorallium imperiale | evm.model.Chr12.424 | CAB4022885.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | P47970 Neuronal pentraxin-2 OS=Cavia porcellus OX=10141 GN=NPTX2 PE | JBrowse |
| Hemicorallium imperiale | evm.model.Chr12.834 | CAB4030184.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | – | JBrowse |
| Hemicorallium imperiale | evm.model.Chr12.900 | CAB3990395.1 | sushi, von Willebrand factor type A, EGF and pentraxin domain-containing 1-like [Paramuricea clavata] | P0C6B8 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Hemicorallium imperiale | evm.model.Chr12.901 | XP_028395050.1 | sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Dendronephthya gigantea] | Q6RUU0 Pentraxin-4 OS=Mus musculus OX=10090 GN=Ptx4 PE=1 SV=2 | JBrowse |
| Hemicorallium imperiale | evm.model.Chr19.11 | XP_028396373.1 | neuronal pentraxin-1-like [Dendronephthya gigantea] | P0C6B8 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Hemicorallium imperiale | evm.model.Chr19.9 | XP_028396328.1 | neuronal pentraxin-1-like [Dendronephthya gigantea] | P0C6B8 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Hemicorallium imperiale | evm.model.Chr20.439 | XP_029185733.2 | uncharacterized protein LOC114953610 [Acropora millepora] | – | JBrowse |
| Hemicorallium imperiale | evm.model.Chr21.112_evm.model.Chr21.113 | CAB4005094.1 | neurogenic locus notch homolog 1-like [Paramuricea clavata] | P14780 Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 P | JBrowse |
