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This orthogroup contains 1,406 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,406 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | ubiquitin | 1219 / 1,406 | 86.7% | 99.5% of 1,225 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 1221 / 1,406 | 86.8% | 99.5% of 1,227 | ≥80% support |
| PANTHER | PTHR10666 | UBIQUITIN | 1076 / 1,406 | 76.5% | 88.6% of 1,214 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 1049 / 1,406 | 74.6% | 85.5% of 1,227 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0019941 Biological Process | modification-dependent protein catabolic process | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0031386 Molecular Function | protein tag activity | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0031625 Molecular Function | ubiquitin protein ligase binding | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 946 / 1,406 | 67.3% | 77.1% of 1,227 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hemicorallium imperiale | evm.model.Chr01.1571 | WP_191990789.1 | ubiquitin family protein, partial [Limosilactobacillus reuteri] | P69200 Ubiquitin-ribosomal protein eL40 fusion protein OS=Leishmani | JBrowse |
| Hemicorallium imperiale | evm.model.Chr01.5467 | XP_028401310.1 | ubiquitin-60S ribosomal protein L40 [Dendronephthya gigantea] | P18101 Ubiquitin-ribosomal protein eL40 fusion protein OS=Drosophil | JBrowse |
| Hemicorallium imperiale | evm.model.Chr06.211 | CAB4029843.1 | ubiquitin [Paramuricea clavata] | Q865C5 Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2 | JBrowse |
| Hemicorallium imperiale | evm.model.Chr07.1007 | YP_009552359.1 | 078R [Cherax quadricarinatus iridovirus] | – | JBrowse |
| Hemicorallium imperiale | evm.model.Chr09.1008 | XP_031567161.1 | ubiquitin-40S ribosomal protein S27a [Actinia tenebrosa] | P79781 Ubiquitin-ribosomal protein eS31 fusion protein OS=Gallus ga | JBrowse |
| Hemicorallium imperiale | evm.model.Chr10.200 | CAB4006218.1 | polyubiquitin-C [Paramuricea clavata] | P0CH28 Polyubiquitin-C OS=Bos taurus OX=9913 GN=UBC PE=1 SV=1 | JBrowse |
| Hemicorallium imperiale | evm.model.Chr13.306 | XP_012302505.1 | ubiquitin-like [Aotus nancymaae] | Q865C5 Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2 | JBrowse |
| Hemicorallium imperiale | evm.model.Chr13.383 | XP_012302505.1 | ubiquitin-like [Aotus nancymaae] | Q865C5 Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2 | JBrowse |
| Hemicorallium imperiale | evm.model.Chr14.469 | XP_028391761.1 | NEDD8 [Dendronephthya gigantea] | Q9VJ33 Ubiquitin-like protein NEDD8 OS=Drosophila melanogaster OX=7 | JBrowse |
| Hemicorallium imperiale | evm.model.Chr17.357 | CAB3980471.1 | ubiquitin 4A [Paramuricea clavata] | B7NZQ9 Ubiquitin-like protein 4A OS=Oryctolagus cuniculus OX=9986 G | JBrowse |
| Hemicorallium imperiale | evm.model.Chr19.270 | XP_010014041.1 | PREDICTED: polyubiquitin-B isoform X8 [Nestor notabilis] | P84589 Ubiquitin (Fragment) OS=Lumbricus terrestris OX=6398 PE=1 SV | JBrowse |
| Hemicorallium imperiale | evm.model.Contig140.30 | MCQ2425593.1 | hypothetical protein [Lachnospiraceae bacterium] | Q865C5 Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2 | JBrowse |
