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This orthogroup contains 187 genes from 127 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 187 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11545 | RIBOSOMAL PROTEIN L13 | 166 / 187 | 88.8% | 97.7% of 170 | ≥80% support |
| Pfam | PF00572 | Ribosomal_L13 — Ribosomal protein L13 | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 166 / 187 | 88.8% | 97.7% of 170 | ≥80% support |
| GO | GO:0017148 Biological Process | negative regulation of translation | 166 / 187 | 88.8% | 97.7% of 170 | ≥80% support |
| GO | GO:0005762 Cellular Component | mitochondrial large ribosomal subunit | 125 / 187 | 66.8% | 73.5% of 170 | ≥50% support |
| KEGG | K02871 | RP-L13, MRPL13, rplM — Ribosome | 149 / 187 | 79.7% | 96.8% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hemicorallium imperiale | evm.model.Chr21.260 | XP_028399709.1 | 39S ribosomal protein L13, mitochondrial-like [Dendronephthya gigantea] | A5IYP4 Large ribosomal subunit protein uL13 OS=Mycoplasmopsis agala | JBrowse |
| Hemicorallium imperiale | evm.model.Contig123.267 | KAF9404759.1 | hypothetical protein HW555_014180 [Spodoptera exigua] | Q6KI60 Small ribosomal subunit protein uS9 OS=Mycoplasma mobile (st | JBrowse |
| Hemicorallium imperiale | evm.model.Contig132.342 | XP_011861219.1 | PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Vollenhovia emeryi] | B2A4Q6 Large ribosomal subunit protein uL13 OS=Natranaerobius therm | JBrowse |
| Hemicorallium imperiale | evm.model.Contig43.21 | CAA0083695.1 | 50S ribosomal protein L13 [BD1-7 clade bacterium] | C5BS66 Large ribosomal subunit protein uL13 OS=Teredinibacter turne | JBrowse |
