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This orthogroup contains 187 genes from 127 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 187 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11545 | RIBOSOMAL PROTEIN L13 | 166 / 187 | 88.8% | 97.7% of 170 | ≥80% support |
| Pfam | PF00572 | Ribosomal_L13 — Ribosomal protein L13 | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 169 / 187 | 90.4% | 99.4% of 170 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 166 / 187 | 88.8% | 97.7% of 170 | ≥80% support |
| GO | GO:0017148 Biological Process | negative regulation of translation | 166 / 187 | 88.8% | 97.7% of 170 | ≥80% support |
| GO | GO:0005762 Cellular Component | mitochondrial large ribosomal subunit | 125 / 187 | 66.8% | 73.5% of 170 | ≥50% support |
| KEGG | K02871 | RP-L13, MRPL13, rplM — Ribosome | 149 / 187 | 79.7% | 96.8% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0333.g5.t1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Alatina alata | Aala_g256.t1 | XP_022173650.1 | uncharacterized protein LOC111036064 [Myzus persicae] | Q6R2W3 SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Aurelia aurita | scaffold18.g48.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold2.g58.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000023353.1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora awi | aawi_s0009.g134.t1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora cervicornis | KAK2568442.1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Actinia equina | EGACTEQ4350012296-PA | XP_031572302.1 | 39S ribosomal protein L13, mitochondrial-like [Actinia tenebrosa] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora florida | aflo_s0262.g16.t1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora gemmifera | agem_s0014.g6.t1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora hemprichii | Ahemp_003327-T1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g22590 | XP_001624082.1 | 39S ribosomal protein L13, mitochondrial [Nematostella vectensis] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Actinoscyphia liui | gene21666.t1 | XP_001624082.1 | 39S ribosomal protein L13, mitochondrial [Nematostella vectensis] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora loripes | alor_g1400.t1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Actinia mediterranea | ENSQPTP00000011754.1 | XP_031572302.1 | 39S ribosomal protein L13, mitochondrial-like [Actinia tenebrosa] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Actinia mediterranea | ENSQPTP00000051639.1 | XP_031572302.1 | 39S ribosomal protein L13, mitochondrial-like [Actinia tenebrosa] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora microphthalma | amic_s0063.g20.t1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Acropora millepora | XP_029202923.1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000029861.1 | XP_029202923.1 | 39S ribosomal protein L13, mitochondrial-like [Acropora millepora] | Q9D1P0 Large ribosomal subunit protein uL13m OS=Mus musculus OX=100 | JBrowse |
| Astreopora myriophthalma | g9178.t1.1 | none | – | JBrowse |
