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This orthogroup contains 18 genes from 10 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 18 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18945 | NEUROTRANSMITTER GATED ION CHANNEL | 16 / 18 | 88.9% | 100.0% of 16 | ≥80% support |
| Pfam | PF02932 | Neur_chan_memb — Neurotransmitter-gated ion-channel transmembrane region | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0006811 Biological Process | monoatomic ion transport | 17 / 18 | 94.4% | 100.0% of 17 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 17 / 18 | 94.4% | 100.0% of 17 | ≥80% support |
| GO | GO:0030594 Molecular Function | neurotransmitter receptor activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0050877 Biological Process | nervous system process | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0045202 Cellular Component | synapse | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0043005 Cellular Component | neuron projection | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0042391 Biological Process | regulation of membrane potential | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0034220 Biological Process | monoatomic ion transmembrane transport | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0004888 Molecular Function | transmembrane signaling receptor activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0007268 Biological Process | chemical synaptic transmission | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0007165 Biological Process | signal transduction | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0005230 Molecular Function | extracellular ligand-gated monoatomic ion channel activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0005216 Molecular Function | monoatomic ion channel activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| Pfam | PF02931 | Neur_chan_LBD — Neurotransmitter-gated ion-channel ligand binding domain | 14 / 18 | 77.8% | 82.4% of 17 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hemicorallium imperiale | evm.model.Chr01.6354 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | O75311 Glycine receptor subunit alpha-3 OS=Homo sapiens OX=9606 GN= | JBrowse |