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This orthogroup contains 18 genes from 10 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 18 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18945 | NEUROTRANSMITTER GATED ION CHANNEL | 16 / 18 | 88.9% | 100.0% of 16 | ≥80% support |
| Pfam | PF02932 | Neur_chan_memb — Neurotransmitter-gated ion-channel transmembrane region | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0006811 Biological Process | monoatomic ion transport | 17 / 18 | 94.4% | 100.0% of 17 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 17 / 18 | 94.4% | 100.0% of 17 | ≥80% support |
| GO | GO:0030594 Molecular Function | neurotransmitter receptor activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0050877 Biological Process | nervous system process | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0045202 Cellular Component | synapse | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0043005 Cellular Component | neuron projection | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0042391 Biological Process | regulation of membrane potential | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0034220 Biological Process | monoatomic ion transmembrane transport | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0004888 Molecular Function | transmembrane signaling receptor activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0007268 Biological Process | chemical synaptic transmission | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0007165 Biological Process | signal transduction | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0005230 Molecular Function | extracellular ligand-gated monoatomic ion channel activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| GO | GO:0005216 Molecular Function | monoatomic ion channel activity | 16 / 18 | 88.9% | 94.1% of 17 | ≥80% support |
| Pfam | PF02931 | Neur_chan_LBD — Neurotransmitter-gated ion-channel ligand binding domain | 14 / 18 | 77.8% | 82.4% of 17 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Callogorgia gracilis | ENSFVQP00000003962.1 | none | – | JBrowse | |
| Dendronephthya gigantea | XP_028405675.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | Q7TNC8 Glycine receptor subunit alpha-2 OS=Mus musculus OX=10090 GN | JBrowse |
| Eunicella cavolini | ENSLDHP00000032780.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | P26714 Gamma-aminobutyric acid receptor subunit beta OS=Lymnaea sta | JBrowse |
| Eunicella cavolini | ENSLDHP00000034084.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Eunicella cavolini | ENSLDHP00000034095.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Eunicella verrucosa | ENSNOVP00005024380.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | Q7TNC8 Glycine receptor subunit alpha-2 OS=Mus musculus OX=10090 GN | JBrowse |
| Eunicella verrucosa | ENSNOVP00005024385.1 | CAB4007421.1 | glycine receptor subunit alpha-3-like [Paramuricea clavata] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Eunicella verrucosa | ENSNOVP00005026505.1 | CAB4007421.1 | glycine receptor subunit alpha-3-like [Paramuricea clavata] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Eunicella verrucosa | ENSNOVP00005030391.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | – | JBrowse |
| Heliopora coerulea | ENSBQFP00000019277.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Hemicorallium imperiale | evm.model.Chr01.6354 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | O75311 Glycine receptor subunit alpha-3 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000024798.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | P24524 Glycine receptor subunit alpha-3 OS=Rattus norvegicus OX=101 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000024829.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | Q7TNC8 Glycine receptor subunit alpha-2 OS=Mus musculus OX=10090 GN | JBrowse |
| Muricea muricata | BRAKERXEIP00000042305.1 | XP_028405675.1 | glycine receptor subunit alpha-2-like [Dendronephthya gigantea] | Q7TNC8 Glycine receptor subunit alpha-2 OS=Mus musculus OX=10090 GN | JBrowse |
| Paramuricea clavata | CAB4007421.1 | CAB4007421.1 | glycine receptor subunit alpha-3-like [Paramuricea clavata] | Q7TNC8 Glycine receptor subunit alpha-2 OS=Mus musculus OX=10090 GN | JBrowse |
| Paramuricea clavata | CAB4007422.1 | CAB4007422.1 | gamma-aminobutyric acid receptor subunit gamma-2 isoform X2 [Paramuricea clavata] | F1R8P4 Glycine receptor subunit alpha-2 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Paramuricea clavata | CAB4018794.1 | CAB4018794.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Pteroeides griseum | ENSPYFP00000002397.1 | none | – | JBrowse |
