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Support counts the member genes carrying the term. % of genes is that count over all 202 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF14048 | MBD_C — C-terminal domain of methyl-CpG binding protein 2 and 3 | 170 / 202 | 84.2% | 93.9% of 181 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 175 / 202 | 86.6% | 99.4% of 176 | ≥80% support |
| PANTHER | PTHR12396 | METHYL-CPG BINDING PROTEIN, MBD | 157 / 202 | 77.7% | 99.4% of 158 | ≥50% support |
| Pfam | PF01429 | MBD — Methyl-CpG binding domain | 161 / 202 | 79.7% | 89.0% of 181 | ≥50% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| GO | GO:0006346 Biological Process | DNA methylation-dependent constitutive heterochromatin formation | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| GO | GO:0008327 Molecular Function | methyl-CpG binding | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| KEGG | K11590 | MBD2 — Chromosome and associated proteins | 157 / 202 | 77.7% | 98.7% of 159 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | 18431_t.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | BRAKERHOCP00005000260.1 | XP_047140768.1 | methyl-CpG-binding domain protein 2 [Hydra vulgaris] | Q9UBB5 Methyl-CpG-binding domain protein 2 OS=Homo sapiens OX=9606 | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005002369.1 | XP_047140768.1 | methyl-CpG-binding domain protein 2 [Hydra vulgaris] | Q9UBB5 Methyl-CpG-binding domain protein 2 OS=Homo sapiens OX=9606 | JBrowse |
| Haliclystus octoradiatus | g5256.t1.1 | none | – | JBrowse |
