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Support counts the member genes carrying the term. % of genes is that count over all 202 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF14048 | MBD_C — C-terminal domain of methyl-CpG binding protein 2 and 3 | 170 / 202 | 84.2% | 93.9% of 181 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 175 / 202 | 86.6% | 99.4% of 176 | ≥80% support |
| PANTHER | PTHR12396 | METHYL-CPG BINDING PROTEIN, MBD | 157 / 202 | 77.7% | 99.4% of 158 | ≥50% support |
| Pfam | PF01429 | MBD — Methyl-CpG binding domain | 161 / 202 | 79.7% | 89.0% of 181 | ≥50% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| GO | GO:0006346 Biological Process | DNA methylation-dependent constitutive heterochromatin formation | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| GO | GO:0008327 Molecular Function | methyl-CpG binding | 151 / 202 | 74.8% | 85.8% of 176 | ≥50% support |
| KEGG | K11590 | MBD2 — Chromosome and associated proteins | 157 / 202 | 77.7% | 98.7% of 159 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0021.g73.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Alatina alata | Aala_g1098.t1 | KAF7668972.1 | hypothetical protein LDENG_00273390 [Lucifuga dentata] | P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | JBrowse |
| Aurelia aurita | scaffold86.g3.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold86.g3.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold4038.g2.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000005475.1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora austera | ENSKKQP00000005482.1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora austera | ENSKKQP00000005488.1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora awi | aawi_s0066.g54.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora cervicornis | KAK2564535.1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0075.g9.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora digitifera | chr2Alt.g4149.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0008.g63.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Actinia equina | EGACTEQ4350017078-PA | XP_031567720.1 | methyl-CpG-binding domain protein 4-like [Actinia tenebrosa] | Q9Z2D6 Methyl-CpG-binding protein 2 OS=Mus musculus OX=10090 GN=Mec | JBrowse |
| Actinia equina | EGACTEQ4350041418-PA | XP_031554633.1 | methyl-CpG-binding domain protein 2-like [Actinia tenebrosa] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora florida | aflo_s0206.g17.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora gemmifera | agem_s0012.g22.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora hemprichii | Ahemp_008921-T1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora hyacinthus | ahya_s0014.g104.t1 | XP_015773644.1 | PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2-like [Acropora digitifera] | Q9Z2E1 Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g19031 | none | – | JBrowse |
