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This orthogroup contains 265 genes from 130 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 265 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR43766 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL | 239 / 265 | 90.2% | 99.6% of 240 | ≥80% support |
| Pfam | PF00579 | tRNA-synt_1b — tRNA synthetases class I (W and Y) | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0004812 Molecular Function | aminoacyl-tRNA ligase activity | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0004830 Molecular Function | tryptophan-tRNA ligase activity | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0006418 Biological Process | tRNA aminoacylation for protein translation | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0006436 Biological Process | tryptophanyl-tRNA aminoacylation | 240 / 265 | 90.6% | 100.0% of 240 | ≥80% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 199 / 265 | 75.1% | 82.9% of 240 | ≥50% support |
| GO | GO:0005759 Cellular Component | mitochondrial matrix | 195 / 265 | 73.6% | 81.3% of 240 | ≥50% support |
| GO | GO:0070183 Biological Process | mitochondrial tryptophanyl-tRNA aminoacylation | 195 / 265 | 73.6% | 81.3% of 240 | ≥50% support |
| KEGG | K01867 | WARS, trpS — Transfer RNA biogenesis | 170 / 265 | 64.2% | 96.1% of 177 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00002.G18012 | MBA4239936.1 | tryptophan--tRNA ligase [Sphingobacteriaceae bacterium] | Q8RGA3 Tryptophan--tRNA ligase OS=Fusobacterium nucleatum subsp. nu | JBrowse |
| Hydra oligactis | HOLI00059.G25959 | WP_105260080.1 | tryptophan--tRNA ligase [Rhodoferax sp. TS-BS-61-7] | Q8P3Z4 Tryptophan--tRNA ligase OS=Xanthomonas campestris pv. campes | JBrowse |
| Hydra oligactis | HOLI00112.G35304 | XP_047129261.1 | tryptophan--tRNA ligase, mitochondrial-like [Hydra vulgaris] | Q9UGM6 Tryptophan--tRNA ligase, mitochondrial OS=Homo sapiens OX=96 | JBrowse |
| Hydra oligactis | HOLI02858.G48427 | WP_031567233.1 | tryptophan--tRNA ligase [Pararheinheimera texasensis] | P57956 Tryptophan--tRNA ligase OS=Pasteurella multocida (strain Pm7 | JBrowse |
| Hydra oligactis | HOLI04020.G57731 | XP_047129261.1 | tryptophan--tRNA ligase, mitochondrial-like [Hydra vulgaris] | Q9CYK1 Tryptophan--tRNA ligase, mitochondrial OS=Mus musculus OX=10 | JBrowse |
