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Support counts the member genes carrying the term. % of genes is that count over all 46 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10799 | SNF2/RAD54 HELICASE FAMILY | 28 / 46 | 60.9% | 65.1% of 43 | ≥50% support |
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 33 / 46 | 71.7% | 78.6% of 42 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 33 / 46 | 71.7% | 78.6% of 42 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 34 / 46 | 73.9% | 77.3% of 44 | ≥50% support |
| GO | GO:0008094 Molecular Function | ATP-dependent activity, acting on DNA | 34 / 46 | 73.9% | 77.3% of 44 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 33 / 46 | 71.7% | 75.0% of 44 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 33 / 46 | 71.7% | 75.0% of 44 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 28 / 46 | 60.9% | 63.6% of 44 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G50378 | WP_075803151.1 | DEAD/DEAH box helicase [Pseudomonas putida] | P94593 Putative ATP-dependent helicase/translocase YwqA OS=Bacillus | JBrowse |
| Hydra oligactis | HOLI00001.G51187 | WP_095157923.1 | DEAD/DEAH box helicase [Pseudomonas sp. Irchel 3E13] | P94593 Putative ATP-dependent helicase/translocase YwqA OS=Bacillus | JBrowse |
| Hydra oligactis | HOLI00014.G9522 | OGB30822.1 | helicase SNF2 [Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40] | P94593 Putative ATP-dependent helicase/translocase YwqA OS=Bacillus | JBrowse |
| Hydra oligactis | HOLI00299.G46705 | WP_051685816.1 | SNF2-related protein [Pararheinheimera texasensis] | A7ZI07 Zorya protein ZorD OS=Escherichia coli O139:H28 (strain E243 | JBrowse |
| Hydra oligactis | HOLI00299.G46990 | WP_208933042.1 | DEAD/DEAH box helicase [Rheinheimera sp. F8] | B0XPE7 TATA-binding protein-associated factor mot1 OS=Aspergillus f | JBrowse |
| Hydra oligactis | HOLI00655.G56826 | WP_240792019.1 | DEAD/DEAH box helicase [Rhodoferax bucti] | O60177 Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosac | JBrowse |
| Hydra oligactis | HOLI00655.G56827 | NBW49555.1 | DEAD/DEAH box helicase [Betaproteobacteria bacterium] | B5BT18 TATA-binding protein-associated factor BTAF1 OS=Arabidopsis | JBrowse |
| Hydra oligactis | HOLI00655.G56828 | TAH11545.1 | MAG: DEAD/DEAH box helicase [Curvibacter sp.] | – | JBrowse |
| Hydra oligactis | HOLI02150.G23157 | MBT9513439.1 | DEAD/DEAH box helicase [Acidovorax sp.] | P75093 Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma | JBrowse |
| Hydra oligactis | HOLI02195.G14013 | GDY35497.1 | hypothetical protein ACINB_13890 [Acidovorax sp. NB1] | – | JBrowse |
