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Support counts the member genes carrying the term. % of genes is that count over all 1,759 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 1462 / 1,759 | 83.1% | 99.9% of 1,464 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1493 / 1,759 | 84.9% | 99.9% of 1,494 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1476 / 1,759 | 83.9% | 98.8% of 1,494 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra vulgaris | XP_065644440.1 | XP_012559382.1 | heterogeneous nuclear ribonucleoprotein A0 [Hydra vulgaris] | P51990 Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xeno | JBrowse |
| Hydra vulgaris | XP_065646966.1 | XP_047134627.1 | heterogeneous nuclear ribonucleoprotein A3 isoform X1 [Hydra vulgaris] | P51990 Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xeno | JBrowse |
| Hydra vulgaris | XP_065646967.1 | XP_047134627.1 | heterogeneous nuclear ribonucleoprotein A3 isoform X1 [Hydra vulgaris] | P51990 Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xeno | JBrowse |
| Hydra vulgaris | XP_065646968.1 | XP_047134627.1 | heterogeneous nuclear ribonucleoprotein A3 isoform X1 [Hydra vulgaris] | P51990 Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xeno | JBrowse |
| Hydra vulgaris | XP_065649881.1 | XP_002155150.3 | uncharacterized RNA-binding protein C660.15 [Hydra vulgaris] | P07909 Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila mel | JBrowse |
| Hydra vulgaris | XP_065651998.1 | XP_047144972.1 | heterogeneous nuclear ribonucleoprotein A/B-like [Hydra vulgaris] | Q99020 Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus | JBrowse |
| Hydra vulgaris | XP_065663553.1 | XP_047142542.1 | RNA-binding protein Musashi homolog 2 isoform X1 [Hydra vulgaris] | G5EFS2 RNA-binding protein Musashi homolog 1 OS=Caenorhabditis eleg | JBrowse |
| Hydra vulgaris | XP_065663554.1 | XP_047142543.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | G5EFS2 RNA-binding protein Musashi homolog 1 OS=Caenorhabditis eleg | JBrowse |
| Hydra vulgaris | XP_065665009.1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | Q8W034 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis tha | JBrowse |
| Hydra vulgaris | XP_065671616.1 | XP_002164005.2 | RNA-binding protein Musashi homolog 2 isoform X1 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Hydra vulgaris | XP_065671617.1 | XP_012555242.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Hydra vulgaris | XP_065671618.1 | XP_012555243.1 | uncharacterized RNA-binding protein C660.15 isoform X4 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Hydra vulgaris | XP_065671619.1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Hydra vulgaris | XP_065671620.1 | XP_012555242.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Hydra vulgaris | XP_065672350.1 | XP_012555246.1 | RNA-binding protein Musashi homolog 2 isoform X1 [Hydra vulgaris] | P48809 Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila me | JBrowse |
| Hydra vulgaris | XP_065672351.1 | XP_012555247.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | P48809 Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila me | JBrowse |
