← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 356 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10644 | DNA REPAIR/RNA PROCESSING CPSF FAMILY | 295 / 356 | 82.9% | 98.3% of 300 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 299 / 356 | 84.0% | 97.4% of 307 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 298 / 356 | 83.7% | 97.1% of 307 | ≥80% support |
| GO | GO:0006378 Biological Process | obsolete mRNA polyadenylation | 294 / 356 | 82.6% | 95.8% of 307 | ≥80% support |
| GO | GO:0005847 Cellular Component | mRNA cleavage and polyadenylation specificity factor complex | 292 / 356 | 82.0% | 95.1% of 307 | ≥80% support |
| Pfam | PF10433 | MMS1_N — Mono-functional DNA-alkylating methyl methanesulfonate N-term | 225 / 356 | 63.2% | 78.1% of 288 | ≥50% support |
| Pfam | PF03178 | CPSF_A — CPSF A subunit region | 217 / 356 | 61.0% | 75.4% of 288 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 218 / 356 | 61.2% | 71.0% of 307 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra vulgaris | XP_065675969.1 | XP_047129274.1 | cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Hydra vulgaris] | A0A0R4IC37 Cleavage and polyadenylation specificity factor subunit 1 OS | JBrowse |
