← Back to the gene family browser
This orthogroup contains 188 genes from 108 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 188 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00001 | 7tm_1 — 7 transmembrane receptor (rhodopsin family) | 158 / 188 | 84.0% | 100.0% of 158 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 166 / 188 | 88.3% | 100.0% of 166 | ≥80% support |
| GO | GO:0007186 Biological Process | G protein-coupled receptor signaling pathway | 165 / 188 | 87.8% | 99.4% of 166 | ≥80% support |
| GO | GO:0004930 Molecular Function | G protein-coupled receptor activity | 161 / 188 | 85.6% | 97.0% of 166 | ≥80% support |
| PANTHER | PTHR24240 | OPSIN | 140 / 188 | 74.5% | 84.9% of 165 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
| GO | GO:0007602 Biological Process | phototransduction | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
| GO | GO:0008020 Molecular Function | G protein-coupled photoreceptor activity | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
| GO | GO:0071482 Biological Process | cellular response to light stimulus | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_032034-T1 | KAJ7370470.1 | Melanopsin [Desmophyllum pertusum] | Q2KNE5 Melanopsin-A OS=Danio rerio OX=7955 GN=opn4a PE=2 SV=3 | JBrowse |
| Lophelia pertusa | OS493_032036-T1 | KAJ7370471.1 | hypothetical protein OS493_032036 [Desmophyllum pertusum] | – | JBrowse |
