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This orthogroup contains 188 genes from 108 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 188 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00001 | 7tm_1 — 7 transmembrane receptor (rhodopsin family) | 158 / 188 | 84.0% | 100.0% of 158 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 166 / 188 | 88.3% | 100.0% of 166 | ≥80% support |
| GO | GO:0007186 Biological Process | G protein-coupled receptor signaling pathway | 165 / 188 | 87.8% | 99.4% of 166 | ≥80% support |
| GO | GO:0004930 Molecular Function | G protein-coupled receptor activity | 161 / 188 | 85.6% | 97.0% of 166 | ≥80% support |
| PANTHER | PTHR24240 | OPSIN | 140 / 188 | 74.5% | 84.9% of 165 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
| GO | GO:0007602 Biological Process | phototransduction | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
| GO | GO:0008020 Molecular Function | G protein-coupled photoreceptor activity | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
| GO | GO:0071482 Biological Process | cellular response to light stimulus | 140 / 188 | 74.5% | 84.3% of 166 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0066.g66.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora austera | ENSKKQP00000042589.1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | Q6XL69 Melanopsin OS=Rutilus rutilus OX=48668 GN=opn4 PE=2 SV=1 | JBrowse |
| Acropora awi | aawi_s0207.g12.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora cervicornis | KAK2557949.1 | XP_015758937.1 | PREDICTED: melanopsin-like [Acropora digitifera] | – | JBrowse |
| Acropora cytherea | acyt_s0002.g212.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora digitifera | chr10Alt.g21561.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0058.g55.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Actinia equina | EGACTEQ4350003793-PA | XP_031548901.1 | rhodopsin, GQ-coupled-like [Actinia tenebrosa] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Actinia equina | EGACTEQ4350040394-PA | XP_031548872.1 | melanopsin-like [Actinia tenebrosa] | – | JBrowse |
| Acropora florida | aflo_s0465.g2.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora gemmifera | agem_s0100.g25.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora hemprichii | Ahemp_004809-T1 | AFZ78086.1 | acropsin 3 [Acropora palmata] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora hemprichii | Ahemp_027020-T1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Acropora hyacinthus | ahya_s0041.g59.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g16939 | AXN75745.1 | opsin [Exaiptasia diaphana] | P35403 Rhodopsin OS=Pomatoschistus minutus OX=13225 GN=rho PE=2 SV= | JBrowse |
| Acropora intermedia | aint_s0084.g12.t1 | XP_029198816.2 | melanopsin-B-like [Acropora millepora] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Actinoscyphia liui | gene23755.t1 | AXN75745.1 | opsin [Exaiptasia diaphana] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Actinoscyphia liui | gene23756.t1 | AXN75742.1 | opsin [Exaiptasia diaphana] | O57422 Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE=2 SV=1 | JBrowse |
| Acropora loripes | alor_g15259.t1 | XP_015758937.1 | PREDICTED: melanopsin-like [Acropora digitifera] | – | JBrowse |
| Actinia mediterranea | ENSQPTP00000035053.1 | XP_031548872.1 | melanopsin-like [Actinia tenebrosa] | O57422 Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE=2 SV=1 | JBrowse |
