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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000000949.1 | XP_028394749.1 | homeobox protein ceh-1-like [Dendronephthya gigantea] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000001098.1 | CAB4018056.1 | homeobox dbx [Paramuricea clavata] | Q22909 Homeobox protein ceh-30 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000001105.1 | CAB4018056.1 | homeobox dbx [Paramuricea clavata] | Q22909 Homeobox protein ceh-30 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000003484.1 | XP_046845136.1 | homeobox protein DLX-2-like [Xenia sp. Carnegie-2017] | Q9W6D8 Homeobox protein BarH-like 1 (Fragment) OS=Gallus gallus OX= | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000003682.1 | CAB3999220.1 | barH-like 1 homeobox [Paramuricea clavata] | Q24255 Homeobox protein B-H1 OS=Drosophila melanogaster OX=7227 GN= | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000004983.1 | CAB3990074.1 | homeobox unplugged-like [Paramuricea clavata] | P53547 Homeobox protein ceh-1 (Fragment) OS=Caenorhabditis elegans | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000005638.1 | CAB4018055.1 | homeobox MOX-1 [Paramuricea clavata] | Q6F2E2 Homeobox protein vex1 OS=Xenopus tropicalis OX=8364 GN=vex1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000006070.1 | CAB3990076.1 | barH-like 1 homeobox [Paramuricea clavata] | Q9UMQ3 Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019427.1 | CAB4016154.1 | homeobox GBX-2-like [Paramuricea clavata] | Q91907 Homeobox protein GBX-2 OS=Xenopus laevis OX=8355 GN=gbx2 PE= | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019431.1 | CAB4016154.1 | homeobox GBX-2-like [Paramuricea clavata] | Q91907 Homeobox protein GBX-2 OS=Xenopus laevis OX=8355 GN=gbx2 PE= | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019535.1 | CAB4003139.1 | homeobox Hox-A5-like [Paramuricea clavata] | P15860 Homeobox protein H90 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019774.1 | CAB4016154.1 | homeobox GBX-2-like [Paramuricea clavata] | P48031 Homeobox protein GBX-2 OS=Mus musculus OX=10090 GN=Gbx2 PE=2 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000021425.1 | XP_028410064.1 | homeobox protein Hox-B3-like [Dendronephthya gigantea] | A1L2P5 Homeobox protein Hox-D3 OS=Xenopus laevis OX=8355 GN=hoxd3 P | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000021429.1 | CAB3982641.1 | homeobox Hox-D3, partial [Paramuricea clavata] | P31247 Homeobox protein Hox-B3 (Fragment) OS=Xenopus laevis OX=8355 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022425.1 | CAB3993069.1 | Homeobox MOX-1, partial [Paramuricea clavata] | F1Q4R9 Homeobox protein MOX-1 OS=Danio rerio OX=7955 GN=meox1 PE=2 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022689.1 | XP_028406039.1 | homeobox protein Hox-C6-like [Dendronephthya gigantea] | P15859 Homeobox protein H55 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022702.1 | XP_028406039.1 | homeobox protein Hox-C6-like [Dendronephthya gigantea] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000023288.1 | XP_028396277.1 | homeobox protein pnx-like [Dendronephthya gigantea] | Q8VIB5 BarH-like 2 homeobox protein OS=Mus musculus OX=10090 GN=Bar | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000023292.1 | XP_028396277.1 | homeobox protein pnx-like [Dendronephthya gigantea] | O88181 BarH-like 2 homeobox protein OS=Rattus norvegicus OX=10116 G | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000024303.1 | XP_028418706.1 | homeobox protein Hox-A7-like [Dendronephthya gigantea] | Q28600 Homeobox protein Hox-A7 (Fragment) OS=Ovis aries OX=9940 GN= | JBrowse |
