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This orthogroup contains 3,368 genes from 149 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 3,368 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 2994 / 3,368 | 88.9% | 98.4% of 3,042 | ≥80% support |
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 2442 / 3,368 | 72.5% | 83.0% of 2,943 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000005946.1 | XP_028415702.1 | fibrillin-2-like [Dendronephthya gigantea] | Q8NFW1 Collagen alpha-1(XXII) chain OS=Homo sapiens OX=9606 GN=COL2 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000010820.1 | CAB3986092.1 | Hypothetical predicted protein [Paramuricea clavata] | P12110 Collagen alpha-2(VI) chain OS=Homo sapiens OX=9606 GN=COL6A2 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000013664.1 | CAB3988505.1 | protocadherin Fat 4-like [Paramuricea clavata] | O15232 Matrilin-3 OS=Homo sapiens OX=9606 GN=MATN3 PE=1 SV=2 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000018949.1 | XP_028390925.1 | uncharacterized protein LOC114515803 isoform X2 [Dendronephthya gigantea] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000018957.1 | XP_028390917.1 | uncharacterized protein LOC114515803 isoform X1 [Dendronephthya gigantea] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000018964.1 | XP_028390933.1 | uncharacterized protein LOC114515803 isoform X3 [Dendronephthya gigantea] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019245.1 | CAB4002381.1 | collagen alpha-2(I) chain-like [Paramuricea clavata] | Q6DCQ6 von Willebrand factor A domain-containing protein 2 OS=Xenop | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019703.1 | CAB3978893.1 | matrilin-3-like isoform X2 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019712.1 | CAB3978893.1 | matrilin-3-like isoform X2 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000019717.1 | CAB3978893.1 | matrilin-3-like isoform X2 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000020615.1 | CAB4036059.1 | partial [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022841.1 | XP_028390676.1 | collagen alpha-2(I) chain-like [Dendronephthya gigantea] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000034406.1 | XP_028414736.1 | collagen alpha-5(VI) chain-like [Dendronephthya gigantea] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000034412.1 | XP_028414736.1 | collagen alpha-5(VI) chain-like [Dendronephthya gigantea] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000035811.1 | CAB3998978.1 | malonyl- decarboxylase, mitochondrial-like [Paramuricea clavata] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
