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This orthogroup contains 1,403 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,403 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24202 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 | 1201 / 1,403 | 85.6% | 98.3% of 1,222 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 1205 / 1,403 | 85.9% | 99.2% of 1,215 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 1202 / 1,403 | 85.7% | 98.9% of 1,215 | ≥80% support |
| Pfam | PF06701 | MIB_HERC2 | 965 / 1,403 | 68.8% | 78.8% of 1,224 | ≥50% support |
| Pfam | PF00569 | ZZ | 867 / 1,403 | 61.8% | 70.8% of 1,224 | ≥50% support |
| Pfam | PF12796 | Ank_2 — Ankyrin repeats (3 copies) | 805 / 1,403 | 57.4% | 65.8% of 1,224 | ≥50% support |
| Pfam | PF18346 | SH3_15 — Mind bomb SH3 repeat domain | 789 / 1,403 | 56.2% | 64.5% of 1,224 | ≥50% support |
| Pfam | PF13920 | zf-C3HC4_3 — Zinc finger, C3HC4 type (RING finger) | 703 / 1,403 | 50.1% | 57.4% of 1,224 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 973 / 1,403 | 69.4% | 80.1% of 1,215 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 972 / 1,403 | 69.3% | 80.0% of 1,215 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 892 / 1,403 | 63.6% | 73.4% of 1,215 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 835 / 1,403 | 59.5% | 68.7% of 1,215 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000031852.1 | CAB3977688.1 | E3 ubiquitin- ligase MIB1 isoform X3 [Paramuricea clavata] | Q86YT6 E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000031889.1 | CAB3977688.1 | E3 ubiquitin- ligase MIB1 isoform X3 [Paramuricea clavata] | Q86YT6 E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens OX=9606 GN= | JBrowse |
