← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 1,220 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11949 | INTERFERON REGULATORY FACTOR | 1031 / 1,220 | 84.5% | 99.9% of 1,032 | ≥80% support |
| Pfam | PF00605 | IRF — Interferon regulatory factor transcription factor | 1004 / 1,220 | 82.3% | 96.8% of 1,037 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1031 / 1,220 | 84.5% | 99.4% of 1,037 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1031 / 1,220 | 84.5% | 99.4% of 1,037 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 1031 / 1,220 | 84.5% | 99.4% of 1,037 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1031 / 1,220 | 84.5% | 99.4% of 1,037 | ≥80% support |
| GO | GO:0002376 Biological Process | immune system process | 1016 / 1,220 | 83.3% | 98.0% of 1,037 | ≥80% support |
| GO | GO:0000976 Molecular Function | transcription cis-regulatory region binding | 1004 / 1,220 | 82.3% | 96.8% of 1,037 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000002467.1 | CAB4002933.1 | interferon regulatory factor 2 isoform X1 [Paramuricea clavata] | Q98925 Interferon regulatory factor 2 OS=Gallus gallus OX=9031 GN=I | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000005106.1 | XP_028392557.1 | interferon regulatory factor 8-like [Dendronephthya gigantea] | Q15306 Interferon regulatory factor 4 OS=Homo sapiens OX=9606 GN=IR | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000008096.1 | CAB3978077.1 | Interferon regulatory factor 2 [Paramuricea clavata] | Q98925 Interferon regulatory factor 2 OS=Gallus gallus OX=9031 GN=I | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000008105.1 | CAB3978077.1 | Interferon regulatory factor 2 [Paramuricea clavata] | Q98925 Interferon regulatory factor 2 OS=Gallus gallus OX=9031 GN=I | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000023618.1 | CAB3979491.1 | interferon regulatory factor 1-like [Paramuricea clavata] | A0FIN4 Interferon regulatory factor 1 OS=Sus scrofa OX=9823 GN=IRF1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000023627.1 | CAB3979490.1 | interferon regulatory factor 1-like [Paramuricea clavata] | A0FIN4 Interferon regulatory factor 1 OS=Sus scrofa OX=9823 GN=IRF1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000023744.1 | CAB3979489.1 | interferon regulatory factor 1 [Paramuricea clavata] | A0FIN4 Interferon regulatory factor 1 OS=Sus scrofa OX=9823 GN=IRF1 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000023755.1 | CAB3979489.1 | interferon regulatory factor 1 [Paramuricea clavata] | A0FIN4 Interferon regulatory factor 1 OS=Sus scrofa OX=9823 GN=IRF1 | JBrowse |
