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Support counts the member genes carrying the term. % of genes is that count over all 784 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00057 | Ldl_recept_a — Low-density lipoprotein receptor domain class A | 653 / 784 | 83.3% | 100.0% of 653 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 663 / 784 | 84.6% | 100.0% of 663 | ≥80% support |
| PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 542 / 784 | 69.1% | 92.2% of 588 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 567 / 784 | 72.3% | 85.5% of 663 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000004671.1 | CAB4015232.1 | basement membrane-specific heparan sulfate proteoglycan core isoform X16 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000004680.1 | XP_046862124.1 | low-density lipoprotein receptor-like [Xenia sp. Carnegie-2017] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000004685.1 | CAB4015232.1 | basement membrane-specific heparan sulfate proteoglycan core isoform X16 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000014874.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000015373.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | O75197 Low-density lipoprotein receptor-related protein 5 OS=Homo s | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000015386.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | O75197 Low-density lipoprotein receptor-related protein 5 OS=Homo s | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000016287.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000018431.1 | XP_028397022.1 | low-density lipoprotein receptor-related protein 8-like [Dendronephthya gigantea] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000024618.1 | none | – | JBrowse | |
| Leptogorgia sarmentosa | ENSAPQP00000037061.1 | XP_028397022.1 | low-density lipoprotein receptor-related protein 8-like [Dendronephthya gigantea] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000037064.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000038338.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000039736.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
